Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq53 194 1e-44 >seq53 Length=257799 Score = 194 bits (214), Expect = 1e-44 Identities = 379/557 (68%), Gaps = 5/557 (1%) Strand=Plus/Plus Query 4539 AACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAA 4598 |||| || || || || || ||| | |||||| || | |||||| ||||| || ||| Sbjct 55499 AACAGCAAGCAAGCGAAGTCCGTATGAAGACCTTCATCCCGGCTAATAAGTTCATTTGAA 55558 Query 4599 AACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCA 4658 || || | || ||||| ||||| | ||| || | ||||||||| | ||| || || || Sbjct 55559 AATGTGAGGCCAGGCATGAAACCACGCTTCTTCATCCAAAATATCGAGGCGAACGATCCC 55618 Query 4659 GAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGC 4717 ||||| |||||||||||||| ||||| || || || | ||| | | |||| | | || Sbjct 55619 GAAAAAAATATGCCTTCTACAGCGGCGAAGGCGACCAGTCGTTCCGCAAACGTTGATTGC 55678 Query 4718 TTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTA 4777 ||||| ||||| | | ||||| | ||||| ||| | | | |||||||| | Sbjct 55679 -TTGTCCGCTATCCACCTGAGAGCCCACTCGGCTTTGCGCTTGATGGATGGAATTGTCTC 55737 Query 4778 TATAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAG 4837 ||||||| ||| || | | ||| ||||| || || || || || || || Sbjct 55738 AATAGCGTCAAACAAAAGAGTCCGGTCATCCAGGTCTCTGATGTAGGTATCAATGAGCAG 55797 Query 4838 GCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGC 4897 | || | || || |||| |||||||| |||||||| || || || || | || Sbjct 55798 GGAGTAGGTCTCTGAGTGTACGTTTTCTATCATGATCTGAAAACCATAGAAACAACGCGC 55857 Query 4898 TTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTC 4957 || | || ||||| ||||| |||||| ||| || | ||||||||| || ||||| || Sbjct 55858 CTCAGCCACCTGAACCTCGTTGGAAAATCGTTCAACGAGGTTTTCGTTAACGATACCATC 55917 Query 4958 ACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT-- 5015 ||| || |||||||||| |||||| || || || || |||||| | || ||| Sbjct 55918 GGAGGCAGCGAAAAACGCCAGAACATGCGAAATGAAATATCGTTCGTTCGAGTTGAGTTT 55977 Query 5016 -TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGC 5074 || ||||||| | || | | | || | ||| || |||||||||| || || Sbjct 55978 GTTATTCCAGTCTATGAGGTCATGCGACAGGTCTATTTCCTCCGCAGTCCAAAAGGATGC 56037 Query 5075 TTCCGCTTTTTTGTACA 5091 | |||| |||||||| Sbjct 56038 CTGTGCTTGTTTGTACA 56054 Score = 159 bits (176), Expect = 3e-34 Identities = 385/574 (67%), Gaps = 19/574 (3%) Strand=Plus/Minus Query 4539 AACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAA 4598 ||||| | || || ||||| ||||| || || || | |||||| ||||| || ||| Sbjct 57744 AACAAGAGGCATGCGAAATCGGTATGCATGCCCTCATCACGGCTAATAAGTTCATTTGAA 57685 Query 4599 AACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCA 4658 || || | || ||||| | ||| | ||||| | ||||||||| | ||| || || || Sbjct 57684 AATGTGAGGCCAGGCATAAGACCGCGTTTTTTCATCCAAAATATCGAGGCGAACGATCCC 57625 Query 4659 GAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTA----ATCGGGACCCGAACGAGCT 4714 || || ||||||||||| || ||||| || || || | |||| | || |||| | Sbjct 57624 GAGAAAAATATGCCTTCCACAGCGGCGAAGGCGACGAGACGTTCGGCAAACG-TCGAG-T 57567 Query 4715 GGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGT 4774 | || ||| |||||| | | ||||| | || || ||||| | ||| || || || Sbjct 57566 G--TTGGTCAGAAATCCACCTGAGAGCCCATTCCGCCTTCTTCTTGATGCAAGGGATGGT 57509 Query 4775 GTATATAGCGTTAAATA---ATTTACTTTTTTCAA-ATGGGTCTTGAATATAAGTGTCTA 4830 | || |||| ||| | ||| | | ||| || |||| || || ||||| | Sbjct 57508 TTCAATGGCGTCAAACAGATATTCCCGCTCGGCAACAT---CCTTG-ATGTATGTGTCGA 57453 Query 4831 TTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGC 4890 | || || |||| | || || || || ||||| || |||||| || |||||||| | Sbjct 57452 TGAGGAGAGAATACGTCTCGGAGTGAATGTTTTCCATCATAATCTGGAACCCGTAAAAAC 57393 Query 4891 ATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTA 4950 | | ||| || | || || ||||| || |||| | || | ||||| ||||| |||| Sbjct 57392 ACCGAGCCTCGGCGACCTGGACTTCATTGGAAAAACGCTCGAGCAAGTTCTCGTTGACTA 57333 Query 4951 TACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCT 5010 | || || || ||||| || || | ||||||||| || |||| | |||| | Sbjct 57332 TTCCATCCGAAGCGGCAAAGAAGGCGAGAACATGAGAGATGAAGTGACGCTCGTTGTCAT 57273 Query 5011 TAA---GTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAA 5067 ||| | || ||||||| | | | |||||| | | || | ||| || | ||||| | Sbjct 57272 TAAGGCGATTGTTCCAGTCGTGAAGATCTTTCGAGAGGTCCATTTCCTCTGCTGTCCAGA 57213 Query 5068 ACGACGCTTCCGCTTTTTTGTACATAGACCAAAT 5101 | || ||||| || || || ||||| |||||| Sbjct 57212 ATGAAGCTTCGGCCTTCTTATACATCTGCCAAAT 57179 Score = 82.4 bits (90), Expect = 7e-11 Identities = 136/194 (70%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 4263 TATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATA 4322 || || || || ||||| ||||||||||| ||||| |||| | || || | ||||| Sbjct 55173 TAATCCGAGACCCGCTTCTCGAAGAAATTGGTTTTCCCTTGCATGGAGATCATGTCCATG 55232 Query 4323 AAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGCAATCGG 4382 || ||||| || || || | ||| |||||||| || | || || | |||| Sbjct 55233 AAGTCAAAGGGGTTTTGTGAGCCGTAGCGTTTTTCATTGCCGAGGGACACCAGGAGTCGG 55292 Query 4383 TCAGCTACAAATTCTATATACTGGCTCATGAG-TTCGCAGTTAATTCCAATTAATCTCAC 4441 ||||| |||||||| || ||||||| |||||| ||||| || || || || | | || Sbjct 55293 TCAGCAACAAATTCGATGTACTGGCACATGAGCCTCGCA-TTCATACCGATGAGTGCTAC 55351 Query 4442 AGGTAGCGCGTATG 4455 || || |||| || Sbjct 55352 TGGGAGGGCGTCTG 55365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427047044508503