Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq151 168 2e-36 seq86 141 2e-28 seq25 84.2 5e-11 >seq151 Length=73757 Score = 168 bits (186), Expect = 2e-36 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| || ||||| || |||||||| |||||||| || || ||| Sbjct 41571 CAGATCTTCGTCAAAACCCTGACAGGGAAGACGATCACTCTCGAGGTCGAGTCGTCCGAC 41512 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| |||||||||||||| ||||| |||||||| ||||||||| Sbjct 41511 ACTATCGACAATGTCAAGACCAAGATTCAGGACAAGGAAGGCATCCCTCCCGACCAGCAA 41452 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| |||||||| | |||||| |||| || || | Sbjct 41451 CGTCTCATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGTACTCTTTCCGACTACAATATT 41392 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| ||||| || Sbjct 41391 CAGAAGGAGTCGACACTTCATCTAGT 41366 Score = 140 bits (154), Expect = 8e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || | || || || || ||||| | |||||||| || ||| Sbjct 41343 CAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACTTTGGAGGTGGAGTCTTCCGAC 41284 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||| |||||||| ||||| |||||||| ||||||||| Sbjct 41283 ACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCAGCAA 41224 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || |||||||| ||||||||||| || || | ||||| | |||||||| | Sbjct 41223 CGTCTCATTTTCGCCGGCAAACAGCTCGAGGACGGCCGTACTCTCTCGGATTATAATATT 41164 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || ||||| || || ||||||| Sbjct 41163 CAGAAAGAGAGTACCCTTCATCTTG 41139 Score = 102 bits (112), Expect = 2e-16 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| |||||||| ||||| || ||||| |||||||| || |||||| Sbjct 42147 CAGATTTTCGTGAAGACTCTCACCGGAAAGACCATCACTCTCGAGGTCGAGTCCTCAGAT 42088 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| |||||||| ||||| || ||||||||||| Sbjct 42087 ACCATCGATAACGTCAAGGCCAAGATCCAAGACAAAGAAGG 42047 Score = 98.7 bits (108), Expect = 2e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 178024 GAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGA 178083 |||| ||||| || |||||||| || |||||||||||||| ||||| || ||||| | | Sbjct 41699 GAATTCCTCCTGATCAGCAACGTCTCATCTTCGCCGGAAAGCAGCTAGAGGATGGCCGCA 41640 Query 178084 CTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130 ||||| ||||||||||| | || || || || || || ||||| ||| Sbjct 41639 CTCTTTCCGATTATAACATTCAGAAGGAGTCGACCCTTCATCTCGTT 41593 Score = 96.9 bits (106), Expect = 8e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 178024 GAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGA 178083 |||||||||| ||||| ||||| || || ||||||||||| ||||| || ||||| | | Sbjct 41980 GAATCCCTCCCGACCAACAACGTCTCATTTTCGCCGGAAAGCAGCTTGAGGATGGCCGAA 41921 Query 178084 CTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||||| ||||||| ||| |||| || || || || || ||||| || Sbjct 41920 CTCTTTCCGATTACAACATCCAGAAGGAGTCTACCCTCCATCTCGT 41875 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || || |||||||| || ||||| || ||||| || || ||| Sbjct 41852 CAAATTTTCGTCAAGACGCTTACAGGAAAGACAATCACTCTGGAGGTTGAGTCTTCCGAC 41793 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 ||||| || ||||| || |||||| |||||||| ||||| Sbjct 41792 ACCATTGACAACGTGAAGACAAAGATCCAGGACAAGGAAGG 41752 >seq86 Length=184889 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||||||||| || ||||||||||| || || || || Sbjct 22772 CAGATCTTCGTCAAGACGCTCACAGGAAAGACTATCACCCTCGAAGTCGAGTCATCGGAT 22713 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| ||||| ||||| || || || |||||||||||| Sbjct 22712 ACTATCGACAACGTCAAGGCCAAGATCCAGGATAAAGAGGGCATTCCGCCGGACCAGCAA 22653 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || || || ||||| ||||| ||| | || ||| | || |||||| | Sbjct 22652 CGTCTGATTTTTGCTGGCAAGCAGCTTGAAGACGGACGCACACTTTCTGACTATAACATT 22593 Query 178104 CAAAAAGAATCAACACTGCATCT 178126 || || || || || || ||||| Sbjct 22592 CAGAAGGAGTCCACCCTCCATCT 22570 Score = 136 bits (150), Expect = 1e-26 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||||| ||||| || || ||||||||||| || || || ||| Sbjct 23049 CAAATCTTTGTTAAGACTCTGACAGGGAAGACCATCACCCTCGAAGTTGAGTCGTCGGAC 22990 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| || || |||||||| ||||| ||| Sbjct 22989 ACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAACAA 22930 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || || || || || |||||||| | ||||| |||| || || || Sbjct 22929 CGCCTGATTTTTGCAGGTAAGCAACTGGAAGATGGTCGTACTCTCTCCGACTACAATATC 22870 Query 178104 CAAAAAGAATCAACACTGCATCT 178126 || || || || || || ||||| Sbjct 22869 CAGAAGGAGTCCACCCTTCATCT 22847 Score = 118 bits (130), Expect = 3e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || ||||| || || ||||| ||||||||||| || || || Sbjct 22495 CAGATCTTTGTCAAGACGCTCACGGGGAAGACGATTACCCTCGAGGTTGAGTCGTCCGAT 22436 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| |||||||||||||| ||||| ||||| || |||||||| Sbjct 22435 ACGATTGACAACGTCAAGGCGAAGATTCAGGACAAGGAAGGCATCCCCCCTGACCAGCAG 22376 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || ||||| || ||||| |||| || |||| || || || Sbjct 22375 CGGTTGATCTTTGCTGGCAAGCAGCTTGAGGATGGGCGGACACTCTCCGACTACAATATC 22316 Query 178104 CAAAAAGA 178111 || || || Sbjct 22315 CAGAAGGA 22308 >seq25 Length=364676 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || ||||| || || ||||||||||| |||||||| || ||| Sbjct 239369 CAAATCTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCGGAC 239310 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| || |||||| || || ||||| || ||||| Sbjct 239309 ACCATCGACAATGTCAAAGCCAAAATCCAGGATAAGGAAGG 239269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203723627402254