Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1 161 1e-34 >seq1 Length=2076502 Score = 161 bits (178), Expect = 1e-34 Identities = 319/470 (68%), Gaps = 8/470 (2%) Strand=Plus/Minus Query 16193 AACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAA 16252 |||| | |||||||||||| || || ||||| || | |||||| |||||||| ||| Sbjct 1598855 AACAGCAAACACGCGAAGTCCGTGTGAAGCCCTTCATCCCGGCTGATGAGTTCGTTCGAA 1598796 Query 16253 AAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCC 16312 || || | || ||||| || || ||||| | ||||||||| | ||| || || || Sbjct 1598795 AATGTGAGGCCAGGCATGAAACCGCGCTTCTTCATCCAGAATATTGAAGCGAACGATCCT 1598736 Query 16313 GAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCT 16372 || || |||||||| || |||| || || |||| | || |||||| |||| | | Sbjct 1598735 GAGAAAAATATACCTTCCACAGCAGCGAAGGCGACAAGTCTTTCCGCAAACGTCGACTGC 1598676 Query 16373 TTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCT 16432 || | ||||| | | |||| ||||| || | || || || || ||||| Sbjct 1598675 TTGTCTGCTATCCACCTGAGCGCCCAATCGGCCTTGCGCTTGATGGAAGGAATTGTTTCA 1598616 Query 16433 ATGGCCTTAAACA----ATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAG 16488 || || | ||||| | ||| | | ||| | ||| | ||||| |||||||| || Sbjct 1598615 ATAGCGTCAAACAGGAGAGTTCGC-TCGTCCGG---ATCTCTGATATAGGTATCAATGAG 1598560 Query 16489 TAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCG 16548 || ||| | || ||||||| ||| ||||| | ||||| ||||||||||| || Sbjct 1598559 CAACGAGTAGGTCTCCGAGTGTACGTTTTCTATCATGGTTTGAAAACCATAGAAGCAACG 1598500 Query 16549 AGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACC 16608 ||||| || | || || || | |||| ||||| | ||||| || || ||||| || Sbjct 1598499 CGCCTCAGCCACCTGAACCTCGTTGGAAAACCGTTCAACGAGGTTTTCGTTAACGATGCC 1598440 Query 16609 GTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGT 16658 ||| ||||| ||||| |||| | || ||||||||| ||||| Sbjct 1598439 ATCAGAGGCAGCGAAAAAGGCCAGAACATGAGAGATGAAATATCGTTCGT 1598390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511412443839920