Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq42 93.3 5e-14 >seq42 Length=396757 Score = 93.3 bits (102), Expect = 5e-14 Identities = 179/263 (68%), Gaps = 6/263 (2%) Strand=Plus/Minus Query 145963 GGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAA 146022 ||||| |||||||| | | || || | ||||| ||||| || | ||| ||| Sbjct 68023 GGGTTTGACTTGATCTTCTCAATGCACTCGCGCAGCTGATCCACCCCTTTGCCCGTGTAG 67964 Query 146023 TCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGC 146082 ||||| | | ||||| ||| | || || || |||| |||||| || || || ||||| Sbjct 67963 TCTGTATCACAATCCACATACTCTGCACCAAAATGCCGCCACTGAAAGCCATATACGGGG 67904 Query 146083 CCCAGGTCCCCGGGCTCCCTG---TGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGAC 146139 || | || || ||||| | || |||||| | | | || || | || ||| Sbjct 67903 CCTAAATCGCC---CTCCCGGCGGTGATGCAGCCCCCTGCTGTCCAGAAACGCGCGCGAC 67847 Query 146140 CCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCC 146199 ||||| |||||||||||||||||||| || | ||| | |||||||| || || Sbjct 67846 CCGTTCCCGTCCCAGATCTTGACGCCCTTCTTCGTGAGGAGCGTCGAGTCCGTCGAGCCG 67787 Query 146200 CTGATGAACCAGAGCAGCTCTTC 146222 ||||||||| |||||||| || Sbjct 67786 TGGATGAACCACAGCAGCTCCTC 67764 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/202 (70%), Gaps = 7/202 (3%) Strand=Plus/Minus Query 145661 GGCTCC-TGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCC 145719 |||||| | ||||||| || || | ||| ||||||| | | |||||||| |||||| Sbjct 68413 GGCTCCCTCTTCAGCTGCTCCTCGAGCGCCTCGACGTGGTCGCGATAGACGTGTGCGTCC 68354 Query 145720 CCCAGGACGTGGATGAAGTCCCCGGGC---TCGAGGCCCGTGAGGTGGGCGACCATGTAG 145776 || || || |||| | || || || |||||||| ||| |||| ||| | Sbjct 68353 CCAAGC---TGTATGACCAGCTCGTGCGCCTCTGTGCCCGTGACGTGCGCGATCATATGT 68297 Query 145777 GTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGC 145836 || || || | |||| || ||||||||||| | || ||||| | ||| | ||||| Sbjct 68296 GTGAGGAGCGCGTAGGATGCGATGTTGAAGGGAATGCCGAGCCCAAGGTCGGCGGAGCGT 68237 Query 145837 TGGTACAGCTGGCAGGAGAGCT 145858 ||||||| |||||||||||| Sbjct 68236 TGGTACATGAGGCAGGAGAGCT 68215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590074542956240