Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq18 91.5 1e-13 >seq18 Length=860724 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032 |||| ||| |||||| |||||||| ||||||| || || | ||||||| ||||| Sbjct 790317 TGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGCGTCCGCCCGTCCTCAAGCTGC 790258 Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092 || || || | || | | ||||||||| ||| | |||||||||||| |||||| Sbjct 790257 TTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTTC 790198 Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152 || || | | | | ||||| | ||| || | |||||| ||||| || || Sbjct 790197 GCCTTGACGTTGTCAATCGTATCGGACGACTCGACCTCGAGGGTAATCGTCTTCCCAGTG 790138 Query 21153 AACGTTTTGACAAATATTTGCAT 21175 | ||||||||| || |||||||| Sbjct 790137 AGCGTTTTGACGAAAATTTGCAT 790115 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 20972 ATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTG 21031 ||| | |||||||||||| |||||||||||||| | || || | | ||||| ||||| Sbjct 790041 ATGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGATAGAGTGCGCCCATCCTCAAGCTG 789982 Query 21032 TTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091 ||||| ||| | || || | ||||||||| || | ||| || ||||| ||||| Sbjct 789981 CTTGCCAGCAAAGATCAGACGCTGCTGGTCGGGCGGAATGCCCTCTTTGTCCTGAATCTT 789922 Query 21092 TTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151 | || || | | ||| ||| || | ||| || | |||||| ||||| || || Sbjct 789921 TGCCTTGACGTTGTCGATAGTGTCCGACGACTCAACCTCAAGGGTAATAGTCTTCCCAGT 789862 Query 21152 TAACGTTTTGACAAATATTTGCAT 21175 | ||| || || || || ||||| Sbjct 789861 AAGCGTCTTCACGAAAATCTGCAT 789838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422257625237096