Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq5 93.3 6e-14 >seq5 Length=1591901 Score = 93.3 bits (102), Expect = 6e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| | || ||||| || || || | ||| | || || Sbjct 947747 ATGCAGATCTTTGTCAAGACGTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCATCC 947688 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| || | ||| ||| || || ||||||||||| || || || ||||| Sbjct 947687 GACACTATTGACAACGTGAAAGCGAAGATCCAGGATAAAGAAGGGATTCCTCCCGATCAG 947628 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | ||||||||||| ||||| || |||| || | || ||||| |||||| ||| Sbjct 947627 CAACGCCTTATTTTTGCTGGAAAGCAGCTAGAAGACGGACGTACATTGTCAGATTACAAT 947568 Query 124719 ATTCAAAAAGA 124729 || || ||||| Sbjct 947567 ATCCAGAAAGA 947557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755453110380800