Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1 109 4e-19 >seq1 Length=2076502 Score = 109 bits (120), Expect = 4e-19 Identities = 125/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 22740 ACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCAT 22799 ||||||| | |||||||| ||||||||||| || | || || || |||||||| |||| Sbjct 1596774 ACGTCTCGTTGCCTTTGCCGCTGTTGAAGGTATCTTCTTCTCAGGATCATTTGCCTCCAT 1596715 Query 22800 ATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAG 22859 |||||| |||||||||| |||||||| || || | || ||||| ||| | ||||| Sbjct 1596714 CTTCTGGATGAAGAAACGCGGTCTCATGCCTGGCTTAACCTTCTCCAATGAGCTCATTAG 1596655 Query 22860 CCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCA 22907 |||||| || || | || || ||||| || | ||||| || || Sbjct 1596654 CCGTGATGAGGGCATGCATACCGATTTTGCATGCCTCCTGTTCAGCCA 1596607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356232271471318