Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq18 91.5 1e-13 >seq18 Length=860724 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 142981 ATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTG 143040 ||||| ||| || || || || || ||||| ||| | |||| ||||| ||||| Sbjct 789536 ATGAAGTGTGGACTCCTTCTGGATATTGTAGTCGGAGAGAGTGCGACCATCTTCCAGTTG 789477 Query 143041 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTT 143100 ||||| ||| ||||||| ||||| || || ||||| ||||| || ||||| ||| || Sbjct 789476 CTTACCCGCAAAGATCAGGCGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTT 789417 Query 143101 TTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGT 143160 || | | || | ||||||| | || ||||| | || | ||||| || || Sbjct 789416 GGCCTTGACGTTGTCGATGGTGTCCGACGACTCGACTTCGAGGGTGATGGTCTTTCCAGT 789357 Query 143161 CAATGTTTTTACGAATATTTGCATA 143185 | ||| || ||||||||||||||| Sbjct 789356 GAGTGTCTTAACGAATATTTGCATA 789332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507012460669920