Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1 120 5e-22 >seq1 Length=2076502 Score = 120 bits (132), Expect = 5e-22 Identities = 329/496 (66%), Gaps = 6/496 (1%) Strand=Plus/Plus Query 125029 TGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACC 125088 |||||||| | || ||||| || |||||||| | || || | |||||||| | |||| Sbjct 1598300 TGTACAAACAAGCACAGGCATCTTTTTGGACTGCAGAGGAAATAGATCTGTCGCATGACC 1598359 Query 125089 TGTACGATTGGGAGA-CTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTG 125147 | || ||| | | | | ||| ||| || ||| | || || || || || || Sbjct 1598360 TCATGGACTGGAACAACAAACTCAACTCGAAC-GAACGATATTTCATCTCTCATGTTCTG 1598418 Query 125148 GCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACGATTCTCTCA 125206 ||||| || || | ||| ||||| ||||| ||||| || || ||||| ||| || || | Sbjct 1598419 GCCTTTTTCGCTGCCTCTGATGGCATCGTTAACGAAAACCTCGTTGA-ACGGTTTTCCAA 1598477 Query 125207 AGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGT 125266 ||| | | | |||| | ||||| || || || |||| |||||| || ||||| Sbjct 1598478 CGAGGTTCAGGTGGCTGAGGCGCGTTGCTTCTATGGTTTTCAAACCATGATAGAAAACGT 1598537 Query 125267 GCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCAAC-GTAAAC 125325 |||||||| | ||||| || ||||| | || || | |||||| | | ||| Sbjct 1598538 ACACTCGGAGACCTACTCGTTGCTCATTGATACCTATATCAGAGATCCGGACGAGCGAAC 1598597 Query 125326 ACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGA 125385 | | || ||| |||| || || || | || || || ||||| | |||| | Sbjct 1598598 TC-TCCTGTTTGACGCTATTGAAACAATTCCTTCCATCAAGCGCAAGGCCGATTGGGCGC 1598656 Query 125386 TTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCG 125445 | ||||||| | ||| | |||| ||| || || ||||| || || ||||| || | Sbjct 1598657 TCAGGTGGATAGCAGACAAGCAGTCGACGTTTGCGGAAAGACTTGTCGCCTTCGCTGCTG 1598716 Query 125446 TAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGAC 125505 | || || || || || || || || || | || || ||| | ||||||||||| Sbjct 1598717 TGGAAGGTATATTTTTCTCAGGATCGTTCGCTTCAATATTCTGGATGAAGAAGCGCGGTT 1598776 Query 125506 TCATGCCCGGACTGAC 125521 ||||||| || || || Sbjct 1598777 TCATGCCTGGCCTCAC 1598792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741056365448560