Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 4e-12 >seq5 Length=1591901 Score = 86.0 bits (94), Expect = 4e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 43918 ATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTG 43977 ||| || ||||||||||| || ||||| ||||| ||| ||| | || || | || Sbjct 947544 ATGAAGGGTGCTCTCTTTCTGGATATTGTAATCTGACAATGTACGTCCGTCTTCTAGCTG 947603 Query 43978 TTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTT 44037 ||||| ||||| || | |||||||| || |||| | ||||||||||| || || Sbjct 947604 CTTTCCAGCAAAAATAAGGCGTTGCTGATCGGGAGGAATCCCTTCTTTATCCTGGATCTT 947663 Query 44038 TTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGT 44097 ||| || | ||| ||| || | | ||| || || | ||| || || || || || Sbjct 947664 CGCTTTCACGTTGTCAATAGTGTCGGATGACTCGACCTCCAACGTGATGGTCTTGCCCGT 947723 Query 44098 TAAAGTCTTCACAAATATTTGCATG 44122 || ||||| ||||| || |||||| Sbjct 947724 CAACGTCTTGACAAAGATCTGCATG 947748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354776276901288