Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq42 93.3 3e-14 >seq42 Length=396757 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 25736 GCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATG-TCCGTGTACTCTGCTCCG 25794 |||||||||||||||| | |||| |||||||| ||| ||| |||||||| || Sbjct 67992 GCAGCTGATCCACCCCTTTGCCCGTGTAGTCTGTA-TCACAATCCACATACTCTGCACCA 67934 Query 25795 AAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAG 25854 |||| || |||||| || || || || || |||| || || || | ||| | | Sbjct 67933 AAATGCCGCCACTGAAAGCCATATACGGGGCCTAAATCGCCCTCCCGGCGGTGATGCAGC 67874 Query 25855 CCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCG 25914 ||||| | |||| ||| | | || || || ||||||||||||| || ||||||| Sbjct 67873 CCCCTGCTGTCCAGAAACGCGCGCGACCCGTTCCCGTCCCAGATCTTGACGCCCTTCTTC 67814 Query 25915 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 25962 | ||| | |||| || || || || |||||||||||||||| Sbjct 67813 GTGAGGAGCGTCGAGTCCGTCGAGCCGTGGATGAACCACAGCAGCTCC 67766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340136331499338