Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq18 131 2e-25 seq5 122 8e-23 seq8 111 1e-19 >seq18 Length=860724 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| ||||||||||| || | || ||| |||||| |||||||| || ||| | Sbjct 790306 CTCCTTCTGAATGTTGTAGTCCGAGAGCGTCCGCCCGTCCTCAAGCTGCTTACCAGCGAA 790247 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| || ||||||||||| || ||||| ||||| ||||| ||| ||| ||||| | Sbjct 790246 GATCAAGCGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTTCGCCTTGACGTT 790187 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | ||||||| ||||||| |||| ||||| || || || || || ||||| || Sbjct 790186 GTCAATCGTATCGGACGACTCGACCTCGAGGGTAATCGTCTTCCCAGTGAGCGTTTTGAC 790127 Query 131223 GAAAATCTGCAT 131234 |||||| ||||| Sbjct 790126 GAAAATTTGCAT 790115 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| |||||||| || || | |||||| ||||| ||||||||||| Sbjct 790034 GTGGACTCCTTCTGAATGTTATAGTCAGATAGAGTGCGCCCATCCTCAAGCTGCTTGCCA 789975 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGC-TT 131156 || |||| | |||||||||||| || || || || |||||||| ||| | | ||| || Sbjct 789974 GCAAAGATCAGACGCTGCTGGTCGGGCGGAATGCCCTCTTTGTCC-TGAATCTTTGCCTT 789916 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 || | || | ||| || | ||||| | || | ||||| || || || || || || Sbjct 789915 GACGTTGTCGATAGTGTCCGACGACTCAACCTCAAGGGTAATAGTCTTCCCAGTAAGCGT 789856 Query 131217 TTTTACGAAAATCTGCAT 131234 || |||||||||||||| Sbjct 789855 CTTCACGAAAATCTGCAT 789838 >seq5 Length=1591901 Score = 122 bits (134), Expect = 8e-23 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||||| ||| || || | ||| | ||||||||||| ||||| || || ||| Sbjct 947748 GCCTCCGCGCAGACGAAGGACGAGATGAAGAGTCGACTCCTTCTGAATATTATAGTCGGA 947807 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || |||||| ||||||||||| ||| |||| | ||| || || || || || Sbjct 947808 AAGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGATCGGGGGG 947867 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||||||||| || ||| ||||| | || | ||||||| ||||| | Sbjct 947868 AATGCCTTCTTTGTCCTGAATCTTCGCCTTGACATTATCAATGGTATCGGATGACTCAAC 947927 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 |||| || | || || || || || ||||| ||||| ||||||||| || Sbjct 947928 CTCGAGAGTGATCGTCTTCCCAGTAAGGGTTTTGACGAAGATCTGCATGCCT 947979 Score = 104 bits (114), Expect = 2e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||||| ||| || || | ||| | ||| ||||| || |||||||||||||| Sbjct 947976 GCCTCCGCGCAGACGAAGAACGAGATGGAGGGTAGACTCTTTCTGAATGTTGTAATCAGA 948035 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| |||||| ||||||||||| ||| |||| | ||| |||||||| ||||| Sbjct 948036 AAGTGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCAGGAGG 948095 Query 131127 GATTC 131131 ||||| Sbjct 948096 GATTC 948100 >seq8 Length=1449076 Score = 111 bits (122), Expect = 1e-19 Identities = 99/124 (80%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || || || | ||| |||||||||||||||||||| ||||| Sbjct 782479 CCGCCACGGAGACGGAGGACCAAGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCGCTG 782538 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| | ||||||||||| |||||| Sbjct 782539 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGAGGG 782598 Query 131128 ATTC 131131 |||| Sbjct 782599 ATTC 782602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472010994551040