Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1 102 2e-16 >seq1 Length=2076502 Score = 102 bits (112), Expect = 2e-16 Identities = 125/170 (74%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 243561 GCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 ||| ||||||||||| |||| | ||| | ||||| || || ||||| |||||||| | Sbjct 1596453 GCTCATTGGCATGAATGCTGACTTGATGTGCCAGTATATTGAGTTCGTTGCCGACCGTCT 1596394 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 | |||| || || ||||||| || |||||| | || || || | ||| ||||| Sbjct 1596393 CCTAGTCGCACTGGGGAATGAGAAGGTCTACAACAAAACAAATCCGTTCGACTTCATGGA 1596334 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGC--GTGTCAG 243728 | || || || || ||||| |||||||||||||| |||| ||||||| Sbjct 1596333 CATGATCTCTCTCCAGGGGAAGACTAACTTCTTCGAGAAGCGGGTGTCAG 1596284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102875676021100