Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq18 132 1e-25 seq5 111 4e-19 seq33 93.3 1e-13 seq7 93.3 1e-13 seq35 89.7 1e-12 seq4 89.7 1e-12 seq23 87.8 4e-12 seq15 87.8 4e-12 seq8 86.0 1e-11 seq186 84.2 5e-11 seq24 84.2 5e-11 seq12 84.2 5e-11 >seq18 Length=860724 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || |||||||| || || |||||||| |||| ||||||||| | | ||| Sbjct 789830 CGAAGACGAAGAACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCTGAGAGTGTC 789771 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| ||||||||||||||||| |||||||| || ||||| || || || Sbjct 789770 CGCCCGTCTTCGAGCTGCTTTCCGGCGAAAATGAGACGTTGTTGGTCGGGGGGGATGCCC 789711 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| ||| |||| |||||| | || || || || | Sbjct 789710 TCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATGGTGTCCGATGACTCGACTTCGAGG 789651 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| || || || || || || Sbjct 789650 GTGATGGTCTTGCCAGTGAGTGTCTTGACGAAGATCTG 789613 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 || |||||||| |||||||| || | ||| ||||||| | ||| | ||||| || ||| Sbjct 790043 AGATGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGATAGAGTGCGCCCATCCTCAAGC 789984 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543 ||||| || || ||||| |||||||||||||| || ||| || ||| ||||||||| Sbjct 789983 TGCTTGCCAGCAAAGATCAGACGCTGCTGGTCGGGCGGAATGCCCTCTTTGTCCTGAATC 789924 Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603 ||| ||| ||| |||| ||||| | | || || || | || || ||||| || Sbjct 789923 TTTGCCTTGACGTTGTCGATAGTGTCCGACGACTCAACCTCAAGGGTAATAGTCTTCCCA 789864 Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| ||||| || Sbjct 789863 GTAAGCGTCTTCACGAAAATCTG 789841 Score = 105 bits (116), Expect = 2e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 || || || || |||||||| |||| |||||||| | | ||| | ||||||||||| Sbjct 789538 AGATGAAGTGTGGACTCCTTCTGGATATTGTAGTCGGAGAGAGTGCGACCATCTTCCAGT 789479 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543 ||||| || || ||||| || || || ||||| ||| || || || ||||||||| Sbjct 789478 TGCTTACCCGCAAAGATCAGGCGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATC 789419 Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603 || ||| ||| |||| |||||| | | || || || | ||||| ||||| || Sbjct 789418 TTGGCCTTGACGTTGTCGATGGTGTCCGACGACTCGACTTCGAGGGTGATGGTCTTTCCA 789359 Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || ||||| Sbjct 789358 GTGAGTGTCTTAACGAATATTTG 789336 Score = 89.7 bits (98), Expect = 1e-12 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 199438 CTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAA 199497 |||||| || | ||||||||| | | |||| || || || |||||||| || ||||| Sbjct 790306 CTCCTTCTGAATGTTGTAGTCCGAGAGCGTCCGCCCGTCCTCAAGCTGCTTACCAGCGAA 790247 Query 199498 GATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGA 199557 ||| | ||||||||||| || || ||||| ||||| ||||| ||| ||| Sbjct 790246 GATCAAGCGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTTCGCCTTGACGTT 790187 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 || | || || | | || || || | || |||||||| || ||||| ||||| || Sbjct 790186 GTCAATCGTATCGGACGACTCGACCTCGAGGGTAATCGTCTTCCCAGTGAGCGTTTTGAC 790127 Query 199618 AAAAATTTG 199626 |||||||| Sbjct 790126 GAAAATTTG 790118 >seq5 Length=1591901 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || || |||||||||||||| || | || ||||| | | ||| | || || Sbjct 947764 AGGACGAGATGAAGAGTCGACTCCTTCTGAATATTATAGTCGGAAAGAGTACGGCCGTCC 947823 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||||||||| || || || || ||| |||||| ||| Sbjct 947824 TCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGATCGGGGGGAATGCCTTCTTTGTCC 947883 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || || | ||| || | || || || || | ||||||||| Sbjct 947884 TGAATCTTCGCCTTGACATTATCAATGGTATCGGATGACTCAACCTCGAGAGTGATCGTC 947943 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || ||||| || || || || Sbjct 947944 TTCCCAGTAAGGGTTTTGACGAAGATCTG 947972 Score = 107 bits (118), Expect = 5e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 199438 CTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAA 199497 ||| || |||| ||||| || | ||| || | ||| ||||| ||||||||||| || || Sbjct 947556 CTCTTTCTGGATATTGTAATCTGACAATGTACGTCCGTCTTCTAGCTGCTTTCCAGCAAA 947615 Query 199498 GATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGA 199557 || || || ||||| || ||| ||| |||||| ||||| ||||| |||||| Sbjct 947616 AATAAGGCGTTGCTGATCGGGAGGAATCCCTTCTTTATCCTGGATCTTCGCTTTCACGTT 947675 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 || | ||||| | || || || ||||||||||| ||||| ||||| | || || || Sbjct 947676 GTCAATAGTGTCGGATGACTCGACCTCCAACGTGATGGTCTTGCCCGTCAACGTCTTGAC 947735 Query 199618 AAAAATTTG 199626 ||| || || Sbjct 947736 AAAGATCTG 947744 >seq33 Length=576204 Score = 93.3 bits (102), Expect = 1e-13 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||| || |||||||| || ||||| |||| ||||||||||| | ||| | ||||| Sbjct 118963 CAGGATGAGTTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATC 119022 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTC 199515 || ||||||||||| |||||||| |||| |||||||| Sbjct 119023 CTCAAGCTGCTTTCCAGCGAAGATCAGACATTGCTGGTC 119061 Score = 89.7 bits (98), Expect = 1e-12 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||| ||||||||||| |||||||| |||| ||||||||| | | || | ||||| Sbjct 136121 CAGGATGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCAACCATC 136180 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTC 199515 || |||||||||| ||||||||| || || || ||||| Sbjct 136181 CTCAAGCTGCTTTCTGGCGAAGATCAGTCGTTGTTGGTC 136219 >seq7 Length=1492718 Score = 93.3 bits (102), Expect = 1e-13 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||| ||||||||||| |||||||| |||| ||||||||| | | ||| | ||||| Sbjct 957536 CAGGATGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCAACCATC 957477 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTC 199515 || |||||||||||||||||||| || | || ||||| Sbjct 957476 CTCAAGCTGCTTTCCGGCGAAGATCAGTCATTGTTGGTC 957438 >seq35 Length=505678 Score = 89.7 bits (98), Expect = 1e-12 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||| ||||||||||| |||| ||| |||| ||||||||||| | ||| | ||||| Sbjct 499490 CAGGATGAGGTGGAGAGTGGACTGCTTCTGGATGTTGTAGTCAGAGAGAGTGCAACCATC 499431 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTC 199515 | |||||| ||| ||||||||| || || |||||||| Sbjct 499430 CCCAAGCTGCATTCTGGCGAAGATCAGTCGTTGCTGGTC 499392 >seq4 Length=1617472 Score = 89.7 bits (98), Expect = 1e-12 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||| ||||||||||| |||||||| |||| |||||||| | | ||| | ||||| Sbjct 70340 CAGGATGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTTGGAGAGAGTGCAACCATC 70281 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTC 199515 || ||||||||||| |||||||| || || || ||||| Sbjct 70280 CTCAAGCTGCTTTCCAGCGAAGATCAGTCGTTGTTGGTC 70242 >seq23 Length=668295 Score = 87.8 bits (96), Expect = 4e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||| |||||||| || |||||||| |||| |||||| || | | ||| | ||||| Sbjct 509391 AGGATGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCC 509332 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTC 199515 || ||||||||||| |||||||| || || |||||||| Sbjct 509331 TCAAGCTGCTTTCCAGCGAAGATCAGTCGTTGCTGGTC 509294 >seq15 Length=1191322 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || ||||||||||| |||| ||||||||| | ||| | |||||| Sbjct 976325 AGAACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTTAGAGTGCGTCCATCC 976266 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || ||||||||||| |||||||| || || |||||||| || Sbjct 976265 TCGAGCTGCTTTCCAGCGAAGATCAGGCGTTGCTGGTCAGG 976225 >seq8 Length=1449076 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | |||||| || ||||||||||| | ||||||||| | || | ||||| Sbjct 782494 AGGACCAAGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCGCTGAGGGTGCGGCCATCC 782553 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 || |||||||| || |||||||| || ||||||||||| ||| Sbjct 782554 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGA 782595 >seq186 Length=4126 Score = 84.2 bits (92), Expect = 5e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||| ||||||||||| |||||||| |||| |||||||| | || ||| | ||||| Sbjct 456 CAGGATGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTTGGACACAGTGCAACCATC 397 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTC 199515 || |||||||||| || |||||| || | || ||||| Sbjct 396 CTCAAGCTGCTTTCTGGTGAAGATCAGTTGTTGTTGGTC 358 >seq24 Length=636752 Score = 84.2 bits (92), Expect = 5e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||| ||||||||||| |||||||| |||| ||||||||| | | ||| | ||||| Sbjct 199831 CAGGATGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCAACCATC 199890 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTC 199515 || ||||||||||| || ||||| || | || ||||| Sbjct 199891 CTCAAGCTGCTTTCCAGCAAAGATCAGTTGTTGTTGGTC 199929 >seq12 Length=1283914 Score = 84.2 bits (92), Expect = 5e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||| ||||||||||| |||||||| |||| |||||||| | | ||| | | ||| Sbjct 1091778 CAGGATGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTTGGAGAGAGTGCAACAATC 1091719 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTC 199515 || |||||||||||||||||||| || | || ||||| Sbjct 1091718 CTCAAGCTGCTTTCCGGCGAAGATCAGTCATTGTTGGTC 1091680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178916977890502