Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq5 114 5e-20 seq18 105 3e-17 >seq5 Length=1591901 Score = 114 bits (126), Expect = 5e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| ||||| || ||||| || || || ||||| || ||||| ||||| Sbjct 947975 ATGCAGATCTTCGTCAAAACCCTTACTGGGAAGACGATCACTCTCGAGGTTGAGTCATCC 947916 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | | || || ||||| || || ||||| ||||| || |||||| Sbjct 947915 GATACCATTGATAATGTCAAGGCGAAGATTCAGGACAAAGAAGGCATTCCCCCCGATCAA 947856 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || ||| | || || || || || || || | ||| | | || |||||| Sbjct 947855 CAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCCGACTATAAT 947796 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 ||| | ||||| | || ||||| Sbjct 947795 ATTCAGAAGGAGTCGACTCTTCA 947773 >seq18 Length=860724 Score = 105 bits (116), Expect = 3e-17 Identities = 207/305 (68%), Gaps = 11/305 (4%) Strand=Plus/Plus Query 451299 ATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCAC 451358 |||||| || ||| || | || || ||||| || || || || ||||||||||||| Sbjct 382831 ATATTGATTTTCCTTGTAGCCACGCTGTCATTACCGTCCCGGCCTACTTCAATGATGCAC 382890 Query 451359 AACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTA 451418 |||||||||| || || ||||| || || ||||||||| | | || || | | || | Sbjct 382891 AACGGCAAGCCACCAAGGATGCTGGTCAGATTGCTGGTCTCGACGTACTGAGGGTAATCA 382950 Query 451419 ATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaa 451478 | || ||||| || |||||||| || || || |||| | |||| | Sbjct 382951 ACGAGCCTACTGCCGCTGCTCTTGCCTACGGTCTAG---------ACCGCGCAGACTCAT 383001 Query 451479 aaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTG 451538 ||| || | ||| |||| ||||| || ||||| || | ||| | || Sbjct 383002 CCGTCATTGCCGTGTACGATCTTGGAGGAGGTACCTTTGATATCTCCAT-CTTGGAGATG 383060 Query 451539 AAGATGGG-GTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 ||| ||| || |||||||| ||| | ||||| ||||| || ||||| || ||||||||| Sbjct 383061 CAGAAGGGTGTCTTTGAAGTCAAGTCGACCAACGGTGACACGCATCTTGGTGGTGAAGAT 383120 Query 451598 ATTGA 451602 |||| Sbjct 383121 TTTGA 383125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975710653949048