Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2 251 9e-62 seq11 152 7e-32 >seq2 Length=1877779 Score = 251 bits (278), Expect = 9e-62 Identities = 598/912 (66%), Gaps = 59/912 (6%) Strand=Plus/Minus Query 6953 CCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCA 7012 ||||| |||||||| | ||||| | ||| | ||||| || |||| ||| Sbjct 372267 CCAAGGGACAGAGGGGCAACGTCAAGGAGCAGGAGGTCCTGGGTCTTTTCGGAGGTATCA 372208 Query 7013 CCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATC 7072 || | | || || |||||||| | || ||||| || || |||||||||||||| || Sbjct 372207 CCGGAAAGAATAGCTGCTTGGACAGCGGCACCGTAGGCAACGGCCTCATCGGGGTTGATG 372148 Query 7073 GTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACAT-TTGTTGAATTTTCGGGAT 7131 | || || | || || ||||| || | ||||| | | ||| || | ||||| Sbjct 372147 CTCTTGTTGGGCTCCTTGCCGTTGAAGAAGTCCGACACGAGCTTGACGA-TACGAGGGAT 372089 Query 7132 TCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC 7191 || || || ||||| || | ||||| || | || || || || |||||||| ||||| Sbjct 372088 ACGGGTGGAACCACCAACAAGGACGATCTCGTGAACGTTGGACTTGTCGATCTTGGAGTC 372029 Query 7192 TCGAAGTGTTTTTTCGACAGGTTCCA---TACATTTACGGAACAAGTCCATACACAGTTC 7248 || || || ||||| || || | ||| | ||||| | ||| |||| || Sbjct 372028 ACGGAGGACCTTCTCGACGGGCTCGAGCGTAC---TGCGGAAGAGATCCTGGCACAACTC 371972 Query 7249 CTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAAT 7308 ||| ||||| ||||| |||| ||| |||||||| || | || ||||| | ||||| || Sbjct 371971 CTCGAAACGGGCACGAGTAAGGGACGTATAGAAGTCGATACCCTCGTAGAGAGAATCGAT 371912 Query 7309 TTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCG 7368 |||||| | || || | | || || | || ||||| || |||||||| || || || Sbjct 371911 TTCAATAGAGGTCTGGGTGGCGGAGGAGAGGGTACGCTTGGCACGCTCACAAGCGGTCCG 371852 Query 7369 TAAACGACGAAGGGCACGCGGG---------------------------TTACC------ 7395 | ||| || | |||||| ||| ||| | Sbjct 371851 GAGACGGCGGACGGCACGGGGGTTGCTAGACAAGTCTAATAATTATATGTTAGCCGAGTC 371792 Query 7396 ---------------GGAA---ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAA 7437 |||| ||| | ||||| | || || || || || | | ||| Sbjct 371791 GGGGAGATAAAGTCTGGAACGCATACCCTTCTTGTTCTTGCGCTTGAATTCCTGAATGAA 371732 Query 7438 GTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGC 7497 ||| | ||| | ||||||||||| ||||||||||| ||||| || ||||| || Sbjct 371731 GTGATTGACGAGACGGTTGTCGAAATCTTCTCCACCCAAGTGGGTATCACCAGCGGTTGC 371672 Query 7498 TTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACC 7557 |||||| || |||||||| | |||||| | | | || |||||||| || || ||||| Sbjct 371671 TTTGACCTCGAAGATACCCTCCTCAATGGTCAGGAGAGAGACATCAAAGGTTCCTCCACC 371612 Query 7558 CAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGAT 7617 ||| ||||| || || |||||| ||| | ||||||||||||||||| || || Sbjct 371611 CAGATCAAAGATAAGGACGTTCCGCTCGCCAGAGACCTTCTTATCGAGACCGTAGGCAAT 371552 Query 7618 AGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGC 7677 ||| || || || || || || || ||||| ||| ||||| ||| | || ||| | || Sbjct 371551 AGCTGCGGCGGTAGGCTCGTTGATGATACGGAGAATGTTCATGCCGGAGATCGTTCCAGC 371492 Query 7678 ATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTC 7737 || || || ||||| || || |||||||| ||||| || ||||| || || || |||| Sbjct 371491 GTCCTTGGTGGCTTGACGCTGAGAATCGTTGAAGTACGCGGGGACGGTGACAACTGCGTT 371432 Query 7738 CGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGA 7797 | || | |||| || || || || || | || ||||| ||| |||| ||| || Sbjct 371431 GTTCACCGTGGTACCCAGGTAAGACTCTGCCGTCTCCTTCATCTTGAGCAGAATCATGGA 371372 Query 7798 TGAAATCTCTTC 7809 || || ||||| Sbjct 371371 GGAGATTTCTTC 371360 Score = 93.3 bits (102), Expect = 5e-14 Identities = 112/152 (74%), Gaps = 3/152 (2%) Strand=Plus/Minus Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023 ||||| | |||||||||||| || ||||| || || || || || ||||| || || Sbjct 371101 GTGTTGTGGGGGTTCATGGCGACCTGATTCTTGGCGGCATCACCAATGAGACGCTCGTTC 371042 Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083 | | | || | ||| || || ||||| || | || || |||||||| || || || Sbjct 371041 T---CGGAGAAGGAGACATAGGAGGGGGTTGTCCTGTTGCCCTGGTCGTTGGCGATGATC 370985 Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || ||||| |||||||||||||| |||||||| Sbjct 370984 TCAACGCGATCGTTTTGCCAGACACCGACGCA 370953 >seq11 Length=1246474 Score = 152 bits (168), Expect = 7e-32 Identities = 198/269 (74%), Gaps = 6/269 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||||||||||||||||| ||| ||||| || || || || ||||| |||| | ||| Sbjct 934158 TCGAAATCTTCACCACCCAGGTGGGTATCACCGGCAGTGGCCTTGACGGCAAAAACTCCT 934217 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||||| | | || |||||||| || || ||||||| || || || || ||| Sbjct 934218 CCGCTGATGTTGAGAAGGGACACATCAAAGGTTCCTCCACCCAAATCGAAGATCAGGACG 934277 Query 7577 TTCGTATCGTCGTCTTTGTT--CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 ||| | || || |||||| ||||||||||||||| || || || || || |||| Sbjct 934278 TTCTTCTC--AGTTTTTGTTTGACGATCGAGACCGTACGCAATGGCAGCGGCAGTGGGTT 934335 Query 7635 CATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 |||| || |||| || |||| | |||||||||||| | | ||||| || || || Sbjct 934336 CATTGATGATACGGAGGACA-TCCAGGCCAGCAATGGCGCCAGCATCCTTGGTGGCCAAG 934394 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 ||||| || ||||| ||||| || ||||| Sbjct 934395 CGTTGAGAGTCGTTGAAGTATGCAGGGAC 934423 Score = 86.0 bits (94), Expect = 8e-12 Identities = 96/128 (75%), Gaps = 3/128 (2%) Strand=Plus/Plus Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| |||||||| ||||||||||| ||||| |||||||||||| | || ||||| Sbjct 934793 CCGATGAGACGCTTAGCATCAAAAACAGTGTTGCGGGGGTTCATGGCGGCCTGATTCTTA 934852 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || || || | ||| || | | | | ||| ||||| || ||||| |||||| Sbjct 934853 GCGGCATCACCAATCAAACGCTCCTCA---GCAGAAAAAGCGACATATGATGGCGTCGTT 934909 Query 8057 CGATTCCC 8064 || || || Sbjct 934910 CGGTTTCC 934917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635130370617040