Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1 113 6e-20 seq3 82.4 9e-11 >seq1 Length=2076502 Score = 113 bits (124), Expect = 6e-20 Identities = 355/539 (66%), Gaps = 11/539 (2%) Strand=Plus/Minus Query 101782 TCTGGGAACTCTATAAGAAGGCTCAAA-TGAGTAATTGGACTGCTGAAGAGGTAGATCTC 101840 ||||| | | |||||||||||| || | || | |||| || || || | || ||| Sbjct 1597177 TCTGGCAGATGTATAAGAAGGCTGAAGCTTCGTTCT-GGACAGCGGAGGAAATGGACCTC 1597119 Query 101841 TCAAAGGATTTGGACGATTGGAAGACTC---TAAATGAAAATGAAAAGAAATTCATAAAA 101897 || |||||| | |||| ||||| | | | || || || || | ||||| Sbjct 1597118 TCGAAGGATCTTCACGACTGGAACAACCGCCTTAACGACAACGAGCGCCACTTCATCTCT 1597059 Query 101898 TACATCCTGGCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAATAT-CAATAACAA 101956 || |||| || |||||||||| |||||||| || || ||||||| | | ||| Sbjct 1597058 CACGTCCTCGCCTTCTTTGCTGCCTCCGATGGGATAGTCAATGAGAATTTGCTCGAACG- 1597000 Query 101957 CTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATCTTTCTATGCGTATCAATGTCATAA 102016 |||| | | || || || | | || || | | |||||||| || || | | || | Sbjct 1596999 CTTTTCCAACGAAGTTCAGGTCGCCGAGGCTCGGTGTTTCTATGGGT-TCCAGATTATGA 1596941 Query 102017 TG-AAATGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTG 102075 || ||| | || ||||| || ||||| |||| || || ||||||| || Sbjct 1596940 TGGAAAACATCCACTCCGAGACGTATTCCCTCCTCATCGACACTTACATCAAGGATGCTG 1596881 Query 102076 CTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGG 102135 | ||| | || | || || || ||| | | || | || || || | ||||| |||| Sbjct 1596880 CCGAGCGGGAGTATCTGTTCGATGCCGTTGAGACCATCCCTTGCATCAAGAAGAAGGCGG 1596821 Query 102136 ATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCA 102194 | |||||| | | |||| ||| | || | | || | || || || || ||| | || Sbjct 1596820 AATGGGCTCTCAGGTGGATTGCTGACCGACACTCGA-CTTTCGCCGAACGTCTCGTTGCC 1596762 Query 102195 TTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAG 102254 ||||| |||||| |||||||||||||| || || || | | || | ||| | ||| Sbjct 1596761 TTTGCCGCTGTTGAAGGTATCTTCTTCTCAGGATCATTTGCCTCCATCTTCTGGATGAAG 1596702 Query 102255 AAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 || || ||||||||||| || | ||||||||| ||||| || ||||| ||||| Sbjct 1596701 AAACGCGGTCTCATGCCTGGCTTAACCTTCTCCAATGAGCTCATTAGCCGTGATGAGGG 1596643 >seq3 Length=1723946 Score = 82.4 bits (90), Expect = 9e-11 Identities = 153/224 (68%), Gaps = 3/224 (1%) Strand=Plus/Plus Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962 || || || ||| | ||| |||| || | ||||||||||||| | ||||||| || Sbjct 703886 GGAACCAACGGTTACTCAAATGGCATCGTGCCAATGCTTCGCGCGTACGACGCCACTGCT 703945 Query 111963 CGCTATGTAAACCAAGCTGG---GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCA 112019 |||||||| |||||| ||| ||| || | |||| ||||| |||| ||| Sbjct 703946 CGCTATGTCGACCAAGGTGGCAACAAACGCCCTGGCGCCTTCGCCATCTATATTGAACCA 704005 Query 112020 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCG 112079 ||||| || ||| | | |||||| | || || | ||||| || | || |||| | Sbjct 704006 TGGCATGCTGATGTTTTCGAGTTCTTGGATCTGAGGAAAAACCATGGAAAGGAAGAGGTG 704065 Query 112080 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTT 112123 || | ||||| |||| || || |||||||| |||||||| Sbjct 704066 CGAGCGAGGGATCTTTTCTATGCCCTTTGGATTCCGGATCTCTT 704109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740025660320