Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1 116 4e-21 >seq1 Length=2076502 Score = 116 bits (128), Expect = 4e-21 Identities = 344/524 (66%), Gaps = 16/524 (3%) Strand=Plus/Plus Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555 ||||| || ||| | || ||||| || ||||||||||| |||| | ||| Sbjct 1596625 GCAAAATCGGTATGCATGCCCTCATCACGGCTAATGAGCTCATTGGAGAAGGTTAAGCCA 1596684 Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615 |||||||| || | |||||| | ||| ||||||| ||| ||| || |||||||| Sbjct 1596685 GGCATGAGACCGCGTTTCTTCATCCAGAAGATGGAGGCAAATGATCCTGAGAAGAAGATA 1596744 Query 119616 CCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCG------ 119669 || || ||| ||| || || | ||||| || || ||| |||||| ||||| Sbjct 1596745 CCTTCAACAGCGGCAAAGGCAACGAGACGTTCGGCGAAA-GTCGAG---TGTCGGTCAGC 1596800 Query 119670 -AACCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTC 119728 | |||| |||||||||| | ||||| || ||||| |||| || | | ||| || Sbjct 1596801 AATCCACCTGAGAGCCCATTCCGCCTTCTTCTTGATGCAAGGGATGGTCTCAACGGCATC 1596860 Query 119729 GAAAAGTTGCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGT 119788 ||| || | || | || ||| ||||||| || || | || ||||| || || || Sbjct 1596861 GAACAGATACTCCCGCTCGGCAGCATCCTTGATGTAAGTGTCGATGAGGAGGGAATACGT 1596920 Query 119789 CTCACCATGAACCATTTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAAT 119848 ||| || | |||| | ||| | |||| || | ||||| |||| | Sbjct 1596921 CTCGGAGTGGATGTTTTCCATCATAATCTGGAACCCATAGAAACACCGAGCCTCGGCGAC 1596980 Query 119849 TTGCACTTCGTCAGCAAAATTGTT-GTTGATATTTTCAAAAACAATTCCATCGGATCCAG 119907 || ||||||| | |||| ||| | | ||| ||| || || |||||||| ||| Sbjct 1596981 CTGAACTTCGT-TGGAAAAGCGTTCGAGCAAATTCTCATTGACTATCCCATCGGAGGCAG 1597039 Query 119908 CGAAGAATGCTAAGATGTACTTTATGAATTTCTGTTCATTATCGTTGAG--TGTT-TTCC 119964 | ||||| || | || || ||||| | | || || ||||| || ||| |||| Sbjct 1597040 CAAAGAAGGCGAGGACGTGAGAGATGAAGTGGCGCTCGTTGTCGTTAAGGCGGTTGTTCC 1597099 Query 119965 AGTCGTCCATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCAG 120008 |||||| | ||| || || | ||||| || || ||||||||| Sbjct 1597100 AGTCGTGAAGATCCTTCGAGAGGTCCATTTCCTCCGCTGTCCAG 1597143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588973747166800