Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1 136 5e-27 >seq1 Length=2076502 Score = 136 bits (150), Expect = 5e-27 Identities = 337/503 (67%), Gaps = 9/503 (2%) Strand=Plus/Plus Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351 |||||||| ||| ||| || ||||| |||||| || ||| ||||||||||| || ||| Sbjct 1596643 CCCTCATCACGGCTAATGAGCTCATTGGAGAAGGTTAAGCCAGGCATGAGACCGCGTTTC 1596702 Query 117352 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 |||| ||| | || | | ||||| || |||||||||||||| || ||| ||||| Sbjct 1596703 TTCATCCAGAAGATGGAGGCAAATGATCCTGAGAAGAAGATACCTTCAACAGCGGCAAAG 1596762 Query 117412 GCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTGCCCATTT 117470 |||| || || |||||||| | |||| | || ||| ||| | | ||||||| Sbjct 1596763 GCAACGAGACGTTCGGCGAAAG-TCGAGTGTCGGTCAGCAATCCACCTGAGAGCCCATTC 1596821 Query 117471 CGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTTTTCAGA 117530 ||||||||||| || || || | || | | ||| || || | | || | || | Sbjct 1596822 CGCCTTCTTCTTGATGCAAGGGATGGTCTCAACGGCATCGAACAGATACTCCCGCTCGGC 1596881 Query 117531 TCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCATTT-CAT 117589 ||||||| ||||| |||| || | ||||| || ||| || | ||| ||| Sbjct 1596882 AGCATCCTTGATGTAAGTGTCGATGAGGAGGGAATACGTCTCGGAGTGGATGTTTTCCAT 1596941 Query 117590 TATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACTTCATCCGCAAAAT 117649 || | || | | ||||| | || || ||| | ||| ||||| | | |||| Sbjct 1596942 CATAATCTGGA-ACCCATAGAAACACCGAGCCTCGGCGACCTGAACTTCGT-TGGAAAAG 1596999 Query 117650 TGTTATTG-ATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGGATGTAC 117708 ||| | | ||||||| || || |||||||| |||||||||| || |||| || Sbjct 1597000 CGTTCGAGCAAATTCTCATTGACTATCCCATCGGAGGCAGCAAAGAAGGCGAGGACGTGA 1597059 Query 117709 TTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAAGATCTTTGGAC 117765 ||||| | || || || || | || | |||||||||| |||||| || || Sbjct 1597060 GAGATGAAGTGGCGCTCGTTGTCGTTAAGGCGGTTGTTCCAGTCGTGAAGATCCTTCGAG 1597119 Query 117766 AAATCAACTTCTTCCGCAGTCCA 117788 | || | ||| ||||| ||||| Sbjct 1597120 AGGTCCATTTCCTCCGCTGTCCA 1597142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978543323440