Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq18 168 1e-36 seq5 161 2e-34 seq7 89.7 1e-12 seq4 89.7 1e-12 seq33 86.0 1e-11 seq24 86.0 1e-11 seq15 86.0 1e-11 seq8 84.2 5e-11 >seq18 Length=860724 Score = 168 bits (186), Expect = 1e-36 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 || ||||| |||||||| || || |||||||| |||| ||||| | |||||||| || Sbjct 789538 AGATGAAGTGTGGACTCCTTCTGGATATTGTAGTCGGAGAGAGTGCGACCATCTTCCAGT 789479 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054 |||||||| || ||||| || ||||||||||| ||||| ||||| || ||||| ||||| Sbjct 789478 TGCTTACCCGCAAAGATCAGGCGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATC 789419 Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 || ||||||||| || ||||||||||| || ||||| ||||| | |||||||| Sbjct 789418 TTGGCCTTGACGTTGTCGATGGTGTCCGACGACTCGACTTCGAGGGTGATGGTCTTTCCA 789359 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||| | |||||| Sbjct 789358 GTGAGTGTCTTAACGAATATTTGCAT 789333 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||||||||| || ||||| || || || ||||| || | || || | ||| ||||| Sbjct 789819 AACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCTGAGAGTGTCCGCCCGTCTTC 789760 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || ||||| || || ||||||||||| || || ||||| || ||||| || Sbjct 789759 GAGCTGCTTTCCGGCGAAAATGAGACGTTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTG 789700 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||||||||| || ||||||||||| || ||||| ||||| | ||||| Sbjct 789699 AATCTTGGCCTTGACGTTGTCGATGGTGTCCGATGACTCGACTTCGAGGGTGATGGTCTT 789640 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 789639 GCCAGTGAGTGTCTTGACGAAGATCTGCAT 789610 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 || || ||||||||||| || ||||| || || || | ||||| | |||||| || ||| Sbjct 790043 AGATGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGATAGAGTGCGCCCATCCTCAAGC 789984 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054 ||||| || || ||||| || || || ||||| || |||||||| |||||||| ||||| Sbjct 789983 TGCTTGCCAGCAAAGATCAGACGCTGCTGGTCGGGCGGAATGCCCTCTTTGTCCTGAATC 789924 Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 ||| ||||||||| || || |||||||| || || |||||||||| ||||| || Sbjct 789923 TTTGCCTTGACGTTGTCGATAGTGTCCGACGACTCAACCTCAAGGGTAATAGTCTTCCCA 789864 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||| | ||||| Sbjct 789863 GTAAGCGTCTTCACGAAAATCTGCAT 789838 Score = 129 bits (142), Expect = 1e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || ||| ||| || ||||| ||||| || | || || | ||| || || ||||| Sbjct 790318 GTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGCGTCCGCCCGTCCTCAAGCTG 790259 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| |||||||| | || || ||||| || || |||||||| ||||| || || || Sbjct 790258 CTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTT 790199 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| ||||| || || || || || || ||||||| |||||| || || Sbjct 790198 CGCCTTGACGTTGTCAATCGTATCGGACGACTCGACCTCGAGGGTAATCGTCTTCCCAGT 790139 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||||| ||||| | |||||| Sbjct 790138 GAGCGTTTTGACGAAAATTTGCAT 790115 Score = 102 bits (112), Expect = 2e-16 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || |||||||||||||| | || || | || ||||| Sbjct 789313 ACGAGGTGAAGCGTAGACTCCTTCTGAATATTGTAATCAGATAGTGTGCGTCCGTCTTCA 789254 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 ||||| || || |||||||| |||||||||||||| ||||| |||| Sbjct 789253 AGCTGTTTGCCAGCGAAGATCAGTCGTTGTTGGTCGGGAGGGATGC 789208 >seq5 Length=1591901 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || |||||||| ||||| || |||||||| || |||| |||||| | || || ||| Sbjct 947767 ACGAGATGAAGAGTCGACTCCTTCTGAATATTATAGTCGGAAAGAGTACGGCCGTCCTCG 947826 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || |||||||| || || ||||||||||||||||| ||| Sbjct 947827 AGCTGCTTGCCAGCGAAGATGAGACGTTGTTGATCGGGGGGAATGCCTTCTTTGTCCTGA 947886 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || |||||||| || || || || || || || | |||||| Sbjct 947887 ATCTTCGCCTTGACATTATCAATGGTATCGGATGACTCAACCTCGAGAGTGATCGTCTTC 947946 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| ||||| | ||||| Sbjct 947947 CCAGTAAGGGTTTTGACGAAGATCTGCAT 947975 Score = 111 bits (122), Expect = 3e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 || ||||| ||| |||||| || ||||||||||| | | || | || ||||| ||| Sbjct 947542 AGATGAAGGGTGCTCTCTTTCTGGATATTGTAATCTGACAATGTACGTCCGTCTTCTAGC 947601 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054 ||||| || || || ||||| ||||| || || |||||||| |||||||| || || || Sbjct 947602 TGCTTTCCAGCAAAAATAAGGCGTTGCTGATCGGGAGGAATCCCTTCTTTATCCTGGATC 947661 Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 || || ||||| ||||| ||||| || || || || | || | ||||| || Sbjct 947662 TTCGCTTTCACGTTGTCAATAGTGTCGGATGACTCGACCTCCAACGTGATGGTCTTGCCC 947721 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| || || || || | ||||| Sbjct 947722 GTCAACGTCTTGACAAAGATCTGCAT 947747 Score = 95.1 bits (104), Expect = 3e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || || || || |||||||| ||||| |||||||| | ||| || | || || || Sbjct 947994 AACGAGATGGAGGGTAGACTCTTTCTGAATGTTGTAATCAGAAAGTGTGCGGCCGTCCTC 948053 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 ||||||||| || ||||||||||| ||||| ||||| ||||| || Sbjct 948054 GAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCAGGAGGGAT 948098 >seq7 Length=1492718 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 ||||| ||||||||||| || || || ||||| |||| ||||| | ||||| || ||| Sbjct 957529 AGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCAACCATCCTCAAGC 957470 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTC 195026 ||||| || |||||||| |||| ||||||||| Sbjct 957469 TGCTTTCCGGCGAAGATCAGTCATTGTTGGTC 957438 >seq4 Length=1617472 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 ||||| ||||||||||| || || || ||||| | || ||||| | ||||| || ||| Sbjct 70333 AGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTTGGAGAGAGTGCAACCATCCTCAAGC 70274 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTC 195026 ||||| || |||||||| |||||||||||||| Sbjct 70273 TGCTTTCCAGCGAAGATCAGTCGTTGTTGGTC 70242 >seq33 Length=576204 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 ||||| ||||||||||| || || || ||||| |||| || || | ||||| || ||| Sbjct 136128 AGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCAACCATCCTCAAGC 136187 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTC 195026 ||||| | |||||||| |||||||||||||| Sbjct 136188 TGCTTTCTGGCGAAGATCAGTCGTTGTTGGTC 136219 >seq24 Length=636752 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 ||||| ||||||||||| || || || ||||| |||| ||||| | ||||| || ||| Sbjct 199838 AGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCAACCATCCTCAAGC 199897 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTC 195026 ||||| || || ||||| ||| |||||||||| Sbjct 199898 TGCTTTCCAGCAAAGATCAGTTGTTGTTGGTC 199929 >seq15 Length=1191322 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || ||||| || || || ||||| ||| ||||| | ||||| || Sbjct 976323 AACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTTAGAGTGCGTCCATCCTC 976264 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 ||||||||| || |||||||| || ||||| ||||| || ||||| Sbjct 976263 GAGCTGCTTTCCAGCGAAGATCAGGCGTTGCTGGTCAGGGGGAAT 976219 >seq8 Length=1449076 Score = 84.2 bits (92), Expect = 5e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| |||||||| ||||| ||| || || | ||||| |||||||| Sbjct 782502 GTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCGCTGAGGGTGCGGCCATCCTCGAGCTG 782561 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 ||| || |||||||| || || || ||||| ||||| || Sbjct 782562 CTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGAGGGAT 782600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109477250138702