Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1 138 1e-27 >seq1 Length=2076502 Score = 138 bits (152), Expect = 1e-27 Identities = 293/435 (67%), Gaps = 2/435 (0%) Strand=Plus/Plus Query 37176 CATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAAT 37235 ||||||||||| ||| | || ||||| | || || | ||||| || |||||||| Sbjct 1596622 CATGCAAAATCGGTATGCATGCCCTCATCACGGCTAATGAGCTCATTGGAGAAGGTTAAG 1596681 Query 37236 CCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAA 37295 || ||||| | ||| | ||| || ||||| || || | ||||| ||||| || ||||| Sbjct 1596682 CCAGGCATGAGACCGCGTTTCTTCATCCAGAAGATGGAGGCAAATGATCCTGAGAAGAAG 1596741 Query 37296 ATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAA 37355 ||||||||||| || ||||| || || |||||| ||||||| || |||| | Sbjct 1596742 ATACCTTCAACAGCGGCAAAGGCAACGAGACGTTCGGCGAAAGTCGAGTGTCGGTCAGCA 1596801 Query 37356 ATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTT 37415 ||||| | | ||| || ||||| || | || || || |||| || | Sbjct 1596802 ATCCACCTGAGAGCCCATTCCGCCTTCTTCTTGATGCAAGGGATGGTCTCAACGGCATCG 1596861 Query 37416 AAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATT 37475 || ||| | | || || ||| | || ||||| || || || | |||| | Sbjct 1596862 AACAGATACTCCCGCTCGGCAGCATCCTTGATGTAAGTGTCGATGAGGAGGGAATACGTC 1596921 Query 37476 TCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAAT 37535 || ||||| || ||||| || ||||| || ||||| ||||||| ||| || | | Sbjct 1596922 TCGGAGTGGATGTTTTCCATCATAATCTGGAACCCATAGAAACACCGAGCCTCGGCGACC 1596981 Query 37536 TGAACATCGTT-AAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGC 37594 ||||| ||||| |||| | | ||| || || ||||| ||||||||||| || || Sbjct 1596982 TGAACTTCGTTGGAAAAGCGTTCGAGC-AAATTCTCATTGACTATCCCATCGGAGGCAGC 1597040 Query 37595 AAAGAAAGCAAGAAC 37609 |||||| || || || Sbjct 1597041 AAAGAAGGCGAGGAC 1597055 Score = 123 bits (136), Expect = 3e-23 Identities = 358/549 (65%), Gaps = 3/549 (1%) Strand=Plus/Minus Query 37197 CCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCttttt 37256 |||||||| | || || | ||| || ||||| || | || ||||| ||||| | || Sbjct 1598825 CCTTCATCCCGGCTGATGAGTTCGTTCGAAAATGTGAGGCCAGGCATGAAACCGCGCTTC 1598766 Query 37257 ttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAAT 37316 || ||||| ||||||| || || ||||| || || || |||||||| || || || || Sbjct 1598765 TTCATCCAGAATATTGAAGCGAACGATCCTGAGAAAAATATACCTTCCACAGCAGCGAAG 1598706 Query 37317 GCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCT 37376 || ||||| | | | || || || | || | ||||| | | |||||| Sbjct 1598705 GCGACAAGTCTTTCCGCAAACGTCGACTGCTTGTCTGCTATCCACCTGAGCGCCCAATCG 1598646 Query 37377 GCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCA 37436 ||||| || | | |||||||||||| || | || || | || || || Sbjct 1598645 GCCTTGCGCTTGATGGAAGGAATTGTTTCAATAGCGTCAAACAGGAGAGTTCGCTCGTCC 1598586 Query 37437 CTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATA 37496 |||| | ||||| |||||||| || || || | || ||||| | ||||| || Sbjct 1598585 GGATCTCTGATATAGGTATCAATGAGCAACGAGTAGGTCTCCGAGTGTACGTTTTCTATC 1598526 Query 37497 GCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTC 37556 | ||||||||||| || || | || |||| | ||||| ||||| |||||| Sbjct 1598525 ATGGTTTGAAAACCATAGAAGCAACGCGCCTCAGCCACCTGAACCTCGTTGGAAAACCGT 1598466 Query 37557 TTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTT 37616 | | | | |||||| ||||| || |||||| || || || || || ||||||| Sbjct 1598465 TCAACGAGGTTTTCGTTAACGATGCCATCAGAGGCAGCGAAAAAGGCCAGAACATGAGAG 1598406 Query 37617 ATAAAATGTCTTTCAT--CATTTGA-TAATTTTTTCCAATCATTAATATCTTTTGATAAA 37673 || |||| || ||| | | |||| | || ||||| || | | || | || | | Sbjct 1598405 ATGAAATATCGTTCGTTCGAGTTGAGTTTGTTGTTCCAGTCCATGAGGTCATGCGACAGA 1598346 Query 37674 TCAACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCA 37733 || | ||| || | ||||||||| |||| ||| |||| |||| | ||| || | | Sbjct 1598345 TCTATTTCCTCTGCAGTCCAAAAAGATGCCTGTGCTTGTTTGTACAGCTGCCATATCTGA 1598286 Query 37734 TTATGTTGT 37742 ||| ||| Sbjct 1598285 GAATGATGT 1598277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592314534388240