Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq42 111 1e-19 >seq42 Length=396757 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 30113 GCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATG-TCCGTGTACTCTGCTCCG 30171 |||||||||||||||| | |||| |||||||| ||| ||| |||||||| || Sbjct 67992 GCAGCTGATCCACCCCTTTGCCCGTGTAGTCTGTA-TCACAATCCACATACTCTGCACCA 67934 Query 30172 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30231 ||||||| |||||| || || || || || || | || ||||| | ||| | | Sbjct 67933 AAATGCCGCCACTGAAAGCCATATACGGGGCCTAAATCGCCCTCCCGGCGGTGATGCAGC 67874 Query 30232 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30291 ||||| |||||| ||| | | || ||||| ||||||||||||| || ||||||| Sbjct 67873 CCCCTGCTGTCCAGAAACGCGCGCGACCCGTTCCCGTCCCAGATCTTGACGCCCTTCTTC 67814 Query 30292 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30341 | ||| | |||| || || || || |||||||||||||||||| Sbjct 67813 GTGAGGAGCGTCGAGTCCGTCGAGCCGTGGATGAACCACAGCAGCTCCTC 67764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408616076111738