Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq30 116 5e-21 >seq30 Length=600136 Score = 116 bits (128), Expect = 5e-21 Identities = 296/451 (66%), Gaps = 12/451 (3%) Strand=Plus/Plus Query 47861 CATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTT 47920 |||||||||| ||||| | ||||| | |||||||| ||||| || ||||| || Sbjct 336599 CATGTCCCCAATCACGCTGCGCATCGATGTTTCCTAGGTATAAGCACGACTGCTTTCCGA 336658 Query 47921 CAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTG 47980 ||||| | ||| | | ||||| || || || || || || || | | Sbjct 336659 GCGAGATATCCGCAGCTGCACGCGAGATCTTGCGCGTGACGAAGGTCCTGCCTCGACGCG 336718 Query 47981 GAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGT 48040 | || || || || || || || |||||||| |||| ||||| || || ||||||| Sbjct 336719 GGCTCTCGTGGTTGAAGAGGATGCCGTTACAGGCAAACATGCCGTACGACTCGCGATAGT 336778 Query 48041 TCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAG 48100 | || ||||||||| | ||||||||||| ||||| || || || || || || | Sbjct 336779 TGACGACGATCCAGTACGCGTAGAGTTTTGCGCAGCCATACGGCGAGCGCGGGTAAAACG 336838 Query 48101 GTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTT 48160 | || ||||| | || || |||||| ||||| || || ||||| || || || | Sbjct 336839 GGGTCGTCTCACTTTGCGGCGTCTCTACGACCTTGCCGTACAGTTCGGACGTCGAGGCCT 336898 Query 48161 GATAGATACGAACCCTATCTTCCATCTCAAGC------AAACGGACTGCCTCAAGCACTC 48214 |||||| || | | | | |||||||| || || || || |||| | Sbjct 336899 GATAGAATCGCA------CGTGCTTCTCAAGCCCGCAGGTGCGCACGGCGTCGAGCAAGC 336952 Query 48215 TCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTTA 48274 |||||| || | | || | || || || |||| |||||| || || ||||| | Sbjct 336953 GCAGGGTACCGAGCCCGTCAACGTCGCCGGTGTATTCGGCCATCTCGAAGGAGACCTTGA 337012 Query 48275 CATGACTCTGTGCCCCAAGATTATAAATCTC 48305 | || |||||| || ||||| || ||||| Sbjct 337013 CGTGTGACTGTGCACCGAGATTGTAGATCTC 337043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665491854483920