Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq5 95.1 2e-14 seq18 84.2 4e-11 >seq5 Length=1591901 Score = 95.1 bits (104), Expect = 2e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| || ||||| | || | ||| || ||||||||||||||| | || | Sbjct 947761 CGAAGGACGAGATGAAGAGTCGACTCCTTCTGAATATTATAGTCGGAAAGAGTACGGCCG 947820 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | || || || || || || | | |||||||| || || || |||||||| Sbjct 947821 TCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGATCGGGGGGAATGCCTTCTTTG 947880 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || || | || | ||| ||| |||||||| |||||||| || ||||| || Sbjct 947881 TCCTGAATCTTCGCCTTGACATTATCAATGGTATCGGATGACTCAACCTCGAGAGTGATC 947940 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || ||||| || || || ||||| Sbjct 947941 GTCTTCCCAGTAAGGGTTTTGACGAAGATCTGCAT 947975 Score = 87.8 bits (96), Expect = 3e-12 Identities = 151/218 (69%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 193144 ATCGAAGTACC-AGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTA 193202 || || ||||| ||||| | || |||||| ||||| || || || || || | Sbjct 947530 ATAGACGTACCGAGATGAAGGGTGCTCTCTTTCTGGATATTGTAATCTGACAATGTACGT 947589 Query 193203 GAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCT 193262 || |||| || ||||| |||||||| | | || ||||| ||||| || |||||| Sbjct 947590 CCGTCTTCTAGCTGCTTTCCAGCAAAAATAAGGCGTTGCTGATCGGGAGGAATCCCTTCT 947649 Query 193263 TTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTT 193322 ||||| || || || | ||| | || |||||| ||||| ||||| || || | || Sbjct 947650 TTATCCTGGATCTTCGCTTTCACGTTGTCAATAGTGTCGGATGACTCGACCTCCAACGTG 947709 Query 193323 ATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || | ||| || ||||| || ||||| Sbjct 947710 ATGGTCTTGCCCGTCAACGTCTTGACAAAGATCTGCAT 947747 >seq18 Length=860724 Score = 84.2 bits (92), Expect = 4e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 193155 AGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAAT 193214 ||||| | ||| | ||| || ||||| |||||||| | || | | ||| || | | Sbjct 789538 AGATGAAGTGTGGACTCCTTCTGGATATTGTAGTCGGAGAGAGTGCGACCATCTTCCAGT 789479 Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || || || ||||| || | | ||||| |||||||| || || || || || || || Sbjct 789478 TGCTTACCCGCAAAGATCAGGCGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATC 789419 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| || | || || || || || ||||| ||||| || || || || || || Sbjct 789418 TTGGCCTTGACGTTGTCGATGGTGTCCGACGACTCGACTTCGAGGGTGATGGTCTTTCCA 789359 Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || ||||||||||| Sbjct 789358 GTGAGTGTCTTAACGAATATTTGCAT 789333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899650958821920