Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 1e-11 >seq5 Length=1591901 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 192345 CTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAA 192404 |||||| |||||| ||||| || ||||| ||| | || || | || || |||||||| Sbjct 947556 CTCTTTCTGGATATTGTAATCTGACAATGTACGTCCGTCTTCTAGCTGCTTTCCAGCAAA 947615 Query 192405 GATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATT 192464 || | | || ||||| || || || ||||||||||| || || || ||| || || Sbjct 947616 AATAAGGCGTTGCTGATCGGGAGGAATCCCTTCTTTATCCTGGATCTTCGCTTTCACGTT 947675 Query 192465 AGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAAT 192524 |||| || || || || || || | || ||||| || || || || || || | Sbjct 947676 GTCAATAGTGTCGGATGACTCGACCTCCAACGTGATGGTCTTGCCCGTCAACGTCTTGAC 947735 Query 192525 AAATATCTGCAT 192536 ||| |||||||| Sbjct 947736 AAAGATCTGCAT 947747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984476140223100