Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq18 86.0 1e-11 >seq18 Length=860724 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 ||||| || || || | || || | || |||| ||| ||||| ||||| || | | Sbjct 789514 ATATTGTAGTCGGAGAGAGTGCGACCATCTTCCAGTTGCTTACCCGCAAAGATCAGGCGT 789455 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 ||||||||||| || || || || || || || || || || || || || || Sbjct 789454 TGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATGGTG 789395 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || ||||| || ||||| || || ||||| || ||||| | ||| |||| |||||| ||| Sbjct 789394 TCCGACGACTCGACTTCGAGGGTGATGGTCTTTCCAGTGAGTGTCTTAACGAATATTTGC 789335 Query 172068 AT 172069 || Sbjct 789334 AT 789333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905132537854800