Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq41 86.0 2e-11 >seq41 Length=397776 Score = 86.0 bits (94), Expect = 2e-11 Identities = 108/146 (74%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 251843 CGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCAT 251902 |||| ||||||||| ||||| || || ||||| ||||||||||||||| | || | Sbjct 48186 CGATGGTCATACGAGAAGGAATGGCGTGTGGATTAATGATGATGTCGGGTACGATGCCCT 48245 Query 251903 CAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTGTCCG 251961 | | ||||| |||||||||| || | ||| || |||||||||| || ||||| || Sbjct 48246 CCGAGGTGAAAGGCATATCCTCTT-GGCGATACGTGATTCCAATAGTACCTTTTTGACCA 48304 Query 251962 TGACGAGAACTGAACTTATCACCAAT 251987 ||||| || ||||| || || || Sbjct 48305 TGACGGGAGGCAAACTTGTCTCCGAT 48330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471811829555122