Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq18 122 6e-23 seq23 91.5 1e-13 seq5 86.0 4e-12 seq33 84.2 1e-11 seq7 84.2 1e-11 seq15 82.4 5e-11 seq8 82.4 5e-11 >seq18 Length=860724 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| ||| ||||||||| ||||| ||||| || || | ||| | || Sbjct 789821 AGAACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCTGAGAGTGTCCGCCCGTCT 789762 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||||||||| || || ||||| ||||| | || | ||||||||||| Sbjct 789761 TCGAGCTGCTTTCCGGCGAAAATGAGACGTTGTTGGTCGGGGGGGATGCCCTCCTTGTCC 789702 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | |||||| || | ||| |||||| Sbjct 789701 TGAATCTTGGCCTTGACGTTGTCGATGGTGTCCGATGACTCGACTTCGAGGGTGATGGTC 789642 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| ||||| || ||||||||||| Sbjct 789641 TTGCCAGTGAGTGTCTTGACGAAGATCTGCAT 789610 Score = 122 bits (134), Expect = 6e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||||||||| ||||| ||||| |||| || || ||||| || || || Sbjct 790029 CTCCTTCTGAATGTTATAGTCAGATAGAGTGCGCCCATCCTCAAGCTGCTTGCCAGCAAA 789970 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||||| || |||||||| |||| | ||||| ||||| | || ||| |||||| Sbjct 789969 GATCAGACGCTGCTGGTCGGGCGGAATGCCCTCTTTGTCCTGAATCTTTGCCTTGACGTT 789910 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||| || |||| ||| || ||||| || || || ||||| || Sbjct 789909 GTCGATAGTGTCCGACGACTCAACCTCAAGGGTAATAGTCTTCCCAGTAAGCGTCTTCAC 789850 Query 34966 AAAGATCTGCAT 34977 || |||||||| Sbjct 789849 GAAAATCTGCAT 789838 Score = 114 bits (126), Expect = 8e-21 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 || |||| ||| ||||||||| || || ||||| || || |||| |||| |||||| Sbjct 789538 AGATGAAGTGTGGACTCCTTCTGGATATTGTAGTCGGAGAGAGTGCGACCATCTTCCAGT 789479 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || || |||||||| ||||| ||||| | || | ||||||||||| | || Sbjct 789478 TGCTTACCCGCAAAGATCAGGCGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATC 789419 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || |||||| | || | || | |||||| || | ||| ||||||||||| Sbjct 789418 TTGGCCTTGACGTTGTCGATGGTGTCCGACGACTCGACTTCGAGGGTGATGGTCTTTCCA 789359 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| || || || ||||| Sbjct 789358 GTGAGTGTCTTAACGAATATTTGCAT 789333 Score = 114 bits (126), Expect = 8e-21 Identities = 150/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 34770 CCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCA 34829 ||| ||| | ||||||||||||||||||||| |||||||| || | ||| | || || | Sbjct 790322 CCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGCGTCCGCCCGTCCTCAA 790263 Query 34830 GTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTA 34889 | ||||| || |||||||||| || |||||||| | || | || |||||||| | | Sbjct 790262 GCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGA 790203 Query 34890 TTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTC 34949 | || |||||| | |||| || | |||||| || | ||| || ||||| | Sbjct 790202 TCTTCGCCTTGACGTTGTCAATCGTATCGGACGACTCGACCTCGAGGGTAATCGTCTTCC 790143 Query 34950 CCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | ||||| || || || || || ||||| Sbjct 790142 CAGTGAGCGTTTTGACGAAAATTTGCAT 790115 >seq23 Length=668295 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 |||| ||||| | |||| ||||||||| ||||| || || || || |||| |||| Sbjct 509391 AGGATGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCC 509332 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || || |||||||| ||||||||||||||||||||||| Sbjct 509331 TCAAGCTGCTTTCCAGCGAAGATCAGTCGTTGCTGGTC 509294 >seq5 Length=1591901 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 || |||| ||||||||| ||||| || || || || || | | || | || || || Sbjct 947542 AGATGAAGGGTGCTCTCTTTCTGGATATTGTAATCTGACAATGTACGTCCGTCTTCTAGC 947601 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 |||||||| || || || || |||||||| || | || | ||| || || || | || Sbjct 947602 TGCTTTCCAGCAAAAATAAGGCGTTGCTGATCGGGAGGAATCCCTTCTTTATCCTGGATC 947661 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || ||| ||| | || | || | |||||| || | || |||||||| ||| Sbjct 947662 TTCGCTTTCACGTTGTCAATAGTGTCGGATGACTCGACCTCCAACGTGATGGTCTTGCCC 947721 Query 34952 GTGAGGGTCTTTACAAAGATCTGCATG 34978 || | ||||| ||||||||||||||| Sbjct 947722 GTCAACGTCTTGACAAAGATCTGCATG 947748 >seq33 Length=576204 Score = 84.2 bits (92), Expect = 1e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||||| ||||| | ||| ||||||||| ||||| ||||| || || ||| |||| Sbjct 136121 CAGGATGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCAACCATC 136180 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || || ||||||| |||||||||||||||||| ||||| Sbjct 136181 CTCAAGCTGCTTTCTGGCGAAGATCAGTCGTTGTTGGTC 136219 >seq7 Length=1492718 Score = 84.2 bits (92), Expect = 1e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||||| ||||| | ||| ||||||||| ||||| ||||| || || ||| |||| Sbjct 957536 CAGGATGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCAACCATC 957477 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || || |||||||||||||||||||||| ||| ||||| Sbjct 957476 CTCAAGCTGCTTTCCGGCGAAGATCAGTCATTGTTGGTC 957438 >seq15 Length=1191322 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| || ||||||||| ||||| ||||| ||| |||| |||| Sbjct 976325 AGAACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTTAGAGTGCGTCCATCC 976266 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || || |||||||| ||||||||||| ||||||||||| Sbjct 976265 TCGAGCTGCTTTCCAGCGAAGATCAGGCGTTGCTGGTC 976228 >seq8 Length=1449076 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | |||| |||||| |||||||| ||||| ||| |||| |||| Sbjct 782494 AGGACCAAGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCGCTGAGGGTGCGGCCATCC 782553 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || || ||||| || ||||||||||| || |||||||| Sbjct 782554 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTC 782591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691585369414