Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq18 114 1e-20 >seq18 Length=860724 Score = 114 bits (126), Expect = 1e-20 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 ||| || ||||| || || ||||||||||| || | | ||||| ||| || || || Sbjct 790041 ATGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGATAGAGTGCGCCCATCCTCAAGCTG 789982 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||||||||| | |||| | ||||| || |||||||| ||||||||||| || ||| | Sbjct 789981 CTTGCCAGCAAAGATCAGACGCTGCTGGTCGGGCGGAATGCCCTCTTTGTCCTG-AATCT 789923 Query 29703 TTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAG 29761 ||| ||||| | || | |||||| || || || ||||| || ||||| || |||| Sbjct 789922 TTGCCTTGACGTTGTCGATAGTGTCCGACGACTCAACCTCAAGGGTAATAGTCTTCCCAG 789863 Query 29762 TTAAGGTTTTAACAAATATCTGCAT 29786 | | || || || || |||||||| Sbjct 789862 TAAGCGTCTTCACGAAAATCTGCAT 789838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385217763373146