Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq18 114 1e-20 seq5 109 5e-19 seq8 82.4 7e-11 >seq18 Length=860724 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| ||||| || ||||| || | || | ||| ||||||||||| || Sbjct 789807 GGTTGACTCCTTCTGGATGTTGTAGTCTGAGAGTGTCCGCCCGTCTTCGAGCTGCTTTCC 789748 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| || || |||||||| |||||||| |||||||| ||||| ||| Sbjct 789747 GGCGAAAATGAGACGTTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTT 789688 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | | ||| || |||| ||||| ||| ||||| || || || Sbjct 789687 GACGTTGTCGATGGTGTCCGATGACTCGACTTCGAGGGTGATGGTCTTGCCAGTGAGTGT 789628 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 789627 CTTGACGAAGATCTGCAT 789610 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | |||| ||| ||||| || ||||| || | ||| | |||||| ||| Sbjct 790320 AAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGCGTCCGCCCGTCCTCAAGC 790261 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || ||| | || | ||||||||||| || ||||||||||||||||| |||| Sbjct 790260 TGCTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATC 790201 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | |||| ||| |||| | ||| || |||| ||| | || || || Sbjct 790200 TTCGCCTTGACGTTGTCAATCGTATCGGACGACTCGACCTCGAGGGTAATCGTCTTCCCA 790141 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| |||||||| ||||| Sbjct 790140 GTGAGCGTTTTGACGAAAATTTGCAT 790115 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| |||||||| ||| | ||| ||| | || || || ||||| || Sbjct 789529 GTGGACTCCTTCTGGATATTGTAGTCGGAGAGAGTGCGACCA-TCTTCCAGTTGCTTACC 789471 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || || || ||||| ||||||||||| |||||||| ||||| ||| Sbjct 789470 CGCAAAGATCAGGCGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTT 789411 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | | ||| || |||| ||||| ||| || || || || || Sbjct 789410 GACGTTGTCGATGGTGTCCGACGACTCGACTTCGAGGGTGATGGTCTTTCCAGTGAGTGT 789351 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 789350 CTTAACGAATATTTGCAT 789333 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || || || || | ||| | ||||| ||||||||||| Sbjct 790034 GTGGACTCCTTCTGAATGTTATAGTCAGATAGAGTGCGCCCATCCTCAAGCTGCTTGCCA 789975 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || || |||||||||||||| || ||||| || ||||| |||||| |||| Sbjct 789974 GCAAAGATCAGACGCTGCTGGTCGGGCGGAATGCCCTCTTTGTCCTGAATCTTTGCCTTG 789915 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||| | | ||| || || | ||| | || || || || || || Sbjct 789914 ACGTTGTCGATAGTGTCCGACGACTCAACCTCAAGGGTAATAGTCTTCCCAGTAAGCGTC 789855 Query 133644 TTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 789854 TTCACGAAAATCTGCAT 789838 >seq5 Length=1591901 Score = 109 bits (120), Expect = 5e-19 Identities = 147/203 (72%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| ||||| ||||| || ||| | || ||| ||||||||||||||||| Sbjct 947779 GTCGACTCCTTCTGAATATTATAGTCGGAAAGAGT--ACGGCCGTCCTCGAGCTGCTTGC 947836 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||| || || || ||||| || |||||||| ||||| ||||| || Sbjct 947837 CAGCGAAGATGAGACGTTGTTGATCGGGGGGAATGCCTTCTTTGTCCTGAATCTTCGCCT 947896 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| || |||| | ||| || |||| |||| || || || || || | Sbjct 947897 TGACATTATCAATGGTATCGGATGACTCAACCTCGAGAGTGATCGTCTTCCCAGTAAGGG 947956 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 |||| ||||| ||||||||| || Sbjct 947957 TTTTGACGAAGATCTGCATGCCT 947979 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/210 (71%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACG--AGTCCTCGAGC 133514 ||| | |||| ||||||||| ||||||||||| || || ||| ||| || ||| Sbjct 947544 ATGAAGGGTGCTCTCTTTCTGGATATTGTAATCTGACA--ATGTACGTCCGTCTTCTAGC 947601 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || |||| || || ||||| |||||||| || ||||| || || |||| Sbjct 947602 TGCTTTCCAGCAAAAATAAGGCGTTGCTGATCGGGAGGAATCCCTTCTTTATCCTGGATC 947661 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || || | | |||| ||||||| | ||| || || | |||| ||| ||||| Sbjct 947662 TTCGCTTTCACGTTGTCAATAGTGTCGGATGACTCGACCTCCAACGTGATGGTCTTGCCC 947721 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATGGCT 133664 |||| || || || || ||||||||| || Sbjct 947722 GTCAACGTCTTGACAAAGATCTGCATGCCT 947751 >seq8 Length=1449076 Score = 82.4 bits (90), Expect = 7e-11 Identities = 81/102 (79%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||| || || || ||||| |||| | ||| | | | |||||||| Sbjct 782500 AAGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCGCTGAGGGTGCGGCCA-TCCTCGAG 782558 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGAT 133555 ||||||||| ||| | || || |||||||||||||||||||| Sbjct 782559 CTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGAGGGAT 782600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483418950915440