Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq42 100 3e-16 >seq42 Length=396757 Score = 100 bits (110), Expect = 3e-16 Identities = 169/241 (70%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 147231 CAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAA 147290 |||||| ||||| || | |||| ||||| ||| | || ||||| ||| || ||||| Sbjct 67991 CAGCTGATCCACCCCTTTGCCCGTGTAGTCTGTATCACAATCCACATACTCTGCACCAAA 67932 Query 147291 GTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCC 147350 |||| |||||| ||||| || || || || | ||||| | | ||| | |||| Sbjct 67931 ATGCCGCCACTGAAAGCCATATACGGGGCCTAAATCGCCCTCCCGGCGGTGAT-GCAGCC 67873 Query 147351 CGCCCGCTTG--AGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCG 147408 | || ||| |||||| || | ||||||| |||||||||| || ||||| Sbjct 67872 C-CCTGCTGTCCAGAAACGCGCGCGACCCGTTCCCGTCCCAGATCTTGACGCCCTTCTTC 67814 Query 147409 GAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCC 147468 | ||| | | |||||||| ||||| |||||||||| ||||||||||| | || ||| Sbjct 67813 GTGAGGAGCGTCGAGTCCGTCGAGCCGTGGATGAACCACAGCAGCTCCTCAATAATACCC 67754 Query 147469 C 147469 | Sbjct 67753 C 67753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583485768158400