Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq18 113 4e-20 >seq18 Length=860724 Score = 113 bits (124), Expect = 4e-20 Identities = 152/209 (73%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 35529 CCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCA 35588 |||| || | || |||||||| ||||||||||| || | | || ||| |||| || | Sbjct 790322 CCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGCGTCCGCCCGTCCTCAA 790263 Query 35589 GCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGA 35648 |||||||||| || || ||||| ||||||||||| | || | || ||||||||| || Sbjct 790262 GCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGA 790203 Query 35649 TCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 |||| ||| | |||| | | ||| ||| ||| || ||||| | || ||||| || Sbjct 790202 TCTTCGCCTTGA-CGTTGTCAATCGTATCGGACGACTCGACCTCGAGGGTAATCGTCTTC 790144 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | ||||| || || || ||||| Sbjct 790143 CCAGTGAGCGTTTTGACGAAAATTTGCAT 790115 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||| || || | | || ||| | || || |||||||| || ||||| Sbjct 790029 CTCCTTCTGAATGTTATAGTCAGATAGAGTGCGCCCATCCTCAAGCTGCTTGCCAGCAAA 789970 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | |||| || ||| |||||| |||||| ||| | || Sbjct 789969 GATCAGACGCTGCTGGTCGGGCGGAATGCCCTCTTTGTCCTGAATCTTTGCCTTGA-CGT 789911 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| ||| || ||||| | || || || || || || | || |||| Sbjct 789910 TGTCGATAGTGTCCGACGACTCAACCTCAAGGGTAATAGTCTTCCCAGTAAGCGTCTTCA 789851 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 789850 CGAAAATCTGCAT 789838 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || ||||| |||| | || || | || ||||| |||||||||||||| Sbjct 789524 CTCCTTCTGGATATTGTAGTCGGAGAGAGTGCGACCATCTTCCAGTTGCTTACCCGCAAA 789465 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || || ||||| | ||| | || |||||||||| ||||| ||| | || Sbjct 789464 GATCAGGCGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGA-CGT 789406 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| ||| || || || | ||||| || || || || | || || | Sbjct 789405 TGTCGATGGTGTCCGACGACTCGACTTCGAGGGTGATGGTCTTTCCAGTGAGTGTCTTAA 789346 Query 35724 CAAATATCTGCAT 35736 | ||||| ||||| Sbjct 789345 CGAATATTTGCAT 789333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450791875714480