Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq5 116 4e-21 seq18 111 2e-19 seq8 86.0 6e-12 >seq5 Length=1591901 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || || | ||||| || || || || ||||| ||||| || |||||| | Sbjct 947749 CCTCCGCGCAGACGAAGGACGAGATGAAGAGTCGACTCCTTCTGAATATTATAGTCGGAA 947808 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| |||||||| ||||| || || || | ||| || |||||||| || Sbjct 947809 AGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGATCGGGGGGA 947868 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||||||||| || ||||| || ||||| || | || ||||| || || || Sbjct 947869 ATGCCTTCTTTGTCCTGAATCTTCGCCTTGACATTATCAATGGTATCGGATGACTCAACC 947928 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||||| || || || || || | ||||| ||||| || ||||| Sbjct 947929 TCGAGAGTGATCGTCTTCCCAGTAAGGGTTTTGACGAAGATCTGCAT 947975 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617 ||| || ||||| || || |||||||| | || ||||||||||| || || |||||||| Sbjct 947592 GTCTTCTAGCTGCTTTCCAGCAAAAATAAGGCGTTGCTGATCGGGAGGAATCCCTTCTTT 947651 Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677 || || || || ||| || ||| | |||||||| || || || || | || || Sbjct 947652 ATCCTGGATCTTCGCTTTCACGTTGTCAATAGTGTCGGATGACTCGACCTCCAACGTGAT 947711 Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||| || || || || || || || || || ||||| Sbjct 947712 GGTCTTGCCCGTCAACGTCTTGACAAAGATCTGCAT 947747 >seq18 Length=860724 Score = 111 bits (122), Expect = 2e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||| ||||| |||||||||||||| | || | ||| || ||||| Sbjct 790318 GTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGCGTCCGCCCGTCCTCAAGCTG 790259 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || || || ||||| |||||||| || || || |||||||| || || || || || Sbjct 790258 CTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTT 790199 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| ||| | || |||||||| || || ||||| ||||| || || || || Sbjct 790198 CGCCTTGACGTTGTCAATCGTATCGGACGACTCGACCTCGAGGGTAATCGTCTTCCCAGT 790139 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| |||||||||||||| Sbjct 790138 GAGCGTTTTGACGAAAATTTGCAT 790115 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || || ||||| || ||||||||||| | || | ||| ||| Sbjct 789818 ACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCTGAGAGTGTCCGCCCGTCTTCG 789759 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || ||||| | ||| || || ||||| || ||||| || || || ||| Sbjct 789758 AGCTGCTTTCCGGCGAAAATGAGACGTTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGA 789699 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | ||||| || || || || ||||| || ||||| || Sbjct 789698 ATCTTGGCCTTGACGTTGTCGATGGTGTCCGATGACTCGACTTCGAGGGTGATGGTCTTG 789639 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || ||||| || ||||| Sbjct 789638 CCAGTGAGTGTCTTGACGAAGATCTGCAT 789610 >seq8 Length=1449076 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| || ||||| |||||||||||||||||||||| Sbjct 782479 CCGCCACGGAGACGGAGGACCAAGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCGCTG 782538 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| ||||| || || |||| |||||||| ||||| || Sbjct 782539 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGAGGG 782598 Query 134607 AT 134608 || Sbjct 782599 AT 782600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396466851120