Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq18 87.8 2e-12 seq5 84.2 2e-11 >seq18 Length=860724 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || |||||||| | | ||| ||||||||||||| || ||| Sbjct 789806 GTTGACTCCTTCTGGATGTTGTAGTCTGAGAGTGTCCGCCCGTCTTCGAGCTGCTTTCCG 789747 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| |||||||||| ||||| || || || | ||||| || || |||||| || Sbjct 789746 GCGAAAATGAGACGTTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTG 789687 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | || ||||| || || || | ||||| || || || Sbjct 789686 ACGTTGTCGATGGTGTCCGATGACTCGACTTCGAGGGTGATGGTCTTGCCAGTGAGTGTC 789627 Query 27231 TTCACAAAGATTTGCATA 27248 || || ||||| |||||| Sbjct 789626 TTGACGAAGATCTGCATA 789609 >seq5 Length=1591901 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||||||||||| || | || | ||| | || || || || |||||||| |||||| Sbjct 947747 TGCCTCCGCGCAGACGAAGGACGAGATGAAGAGTCGACTCCTTCTGAATATTATAGTCGG 947806 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | || |||| |||||||| || || ||| | |||||||| |||||||| || | Sbjct 947807 AAAGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGATCGGGGG 947866 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || ||||| || ||||| || | | || | || || | | |||| Sbjct 947867 GAATGCCTTCTTTGTCCTGAATCTTCGCCTTGACATTATCAATGGTATCGGATGACTCAA 947926 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || ||||| || | || || || || ||||| || ||||| ||||| Sbjct 947927 CCTCGAGAGTGATCGTCTTCCCAGTAAGGGTTTTGACGAAGATCTGCAT 947975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424932815260272