Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 seq3 82.4 9e-11 >seq1 Length=2076502 Score = 107 bits (118), Expect = 2e-18 Identities = 354/539 (66%), Gaps = 11/539 (2%) Strand=Plus/Minus Query 94406 TCTGGGAACTCTATAAGAAGGCTCAAA-TGAGTAATTGGACTGCTGAAGAGGTAGATCTC 94464 ||||| | | |||||||||||| || | || | |||| || || || | || ||| Sbjct 1597177 TCTGGCAGATGTATAAGAAGGCTGAAGCTTCGTTCT-GGACAGCGGAGGAAATGGACCTC 1597119 Query 94465 TCAAAGGATTTGGACGATTGGAAGACTC---TAAATGAAAATGAAAAGAAATTCATAAAA 94521 || |||||| | |||| ||||| | | | || || || || | ||||| Sbjct 1597118 TCGAAGGATCTTCACGACTGGAACAACCGCCTTAACGACAACGAGCGCCACTTCATCTCT 1597059 Query 94522 TACATCCTGGCATTCTTTGCTGGATCCGATGGAATTGTTTTTGAGAATAT-CAATAACAA 94580 || |||| || |||||||||| |||||||| || || ||||||| | | ||| Sbjct 1597058 CACGTCCTCGCCTTCTTTGCTGCCTCCGATGGGATAGTCAATGAGAATTTGCTCGAACG- 1597000 Query 94581 CTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATCCTTCTATGCGTATCAGTGTCATAA 94640 |||| | | || || || | | || || | | ||||||| || ||| | || | Sbjct 1596999 CTTTTCCAACGAAGTTCAGGTCGCCGAGGCTCGGTGTTTCTATGGGTTCCAGATT-ATGA 1596941 Query 94641 TG-AAATGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTG 94699 || ||| | || ||||| || ||||| |||| || || ||||||| || Sbjct 1596940 TGGAAAACATCCACTCCGAGACGTATTCCCTCCTCATCGACACTTACATCAAGGATGCTG 1596881 Query 94700 CTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGG 94759 | ||| | || | || || || ||| | | || | || || || | ||||| |||| Sbjct 1596880 CCGAGCGGGAGTATCTGTTCGATGCCGTTGAGACCATCCCTTGCATCAAGAAGAAGGCGG 1596821 Query 94760 ATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCA 94818 | |||||| | | |||| ||| | || | | || | || || || || ||| | || Sbjct 1596820 AATGGGCTCTCAGGTGGATTGCTGACCGACACTCGA-CTTTCGCCGAACGTCTCGTTGCC 1596762 Query 94819 TTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAG 94878 ||||| |||||| |||||||||||||| || || || | | || | ||| | ||| Sbjct 1596761 TTTGCCGCTGTTGAAGGTATCTTCTTCTCAGGATCATTTGCCTCCATCTTCTGGATGAAG 1596702 Query 94879 AAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 || || ||||||||||| || | ||||||||| ||||| || ||||| ||||| Sbjct 1596701 AAACGCGGTCTCATGCCTGGCTTAACCTTCTCCAATGAGCTCATTAGCCGTGATGAGGG 1596643 >seq3 Length=1723946 Score = 82.4 bits (90), Expect = 9e-11 Identities = 154/225 (68%), Gaps = 5/225 (2%) Strand=Plus/Plus Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572 || || || ||| | ||| |||| || | ||||||||||||| | ||||||| || Sbjct 703886 GGAACCAACGGTTACTCAAATGGCATCGTGCCAATGCTTCGCGCGTACGACGCCACTGCT 703945 Query 104573 CGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCC 104628 |||||||| | |||| | ||| | || | || | |||| ||||| |||| || Sbjct 703946 CGCTATGTCGACCAAGGT-GGCAACAAACGCCCTGGCGCCTTCGCCATCTATATTGAACC 704004 Query 104629 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGC 104688 |||||| || ||| | | |||||| | || || | ||||| || | || |||| Sbjct 704005 ATGGCATGCTGATGTTTTCGAGTTCTTGGATCTGAGGAAAAACCATGGAAAGGAAGAGGT 704064 Query 104689 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTT 104733 ||| | ||||| |||| || || |||||||| |||||||| Sbjct 704065 GCGAGCGAGGGATCTTTTCTATGCCCTTTGGATTCCGGATCTCTT 704109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583258569027440