Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 >seq1 Length=2076502 Score = 118 bits (130), Expect = 1e-21 Identities = 343/523 (66%), Gaps = 10/523 (2%) Strand=Plus/Plus Query 74751 GCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCA 74810 ||||| || |||| ||| ||||| | ||| || | ||||| || || | | |||| Sbjct 1596625 GCAAAATCGGTATGCATGCCCTCATCACGGCTAATGAGCTCATTGGAGAAGGTTAAGCCA 1596684 Query 74811 GGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATG 74870 ||||| || || || ||||||| ||| ||||||| || || || ||||||||| Sbjct 1596685 GGCATGAGACCGCGTTTCTTCATCCAGAAGATGGAGGCAAATGATCCTGAGAAGAAGATA 1596744 Query 74871 CCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACG--GTGCATCGGA-AGTCATC 74927 ||||| ||| |||||||| || || |||| ||||| | | | |||| || ||| Sbjct 1596745 CCTTCAACAGCGGCAAAGGCAACGAGACGTTCGGCGAAAGTCGAGTGTCGGTCAGCAATC 1596804 Query 74928 CAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAG 74987 || | |||||||||| || || |||| ||||| || || | || | ||| Sbjct 1596805 CACCTGAGAGCCCATTCCGCCTTCTTCTTGATGCAAGGGATGGTCTCAACGGCATCGAAC 1596864 Query 74988 AGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCC 75047 || || ||| | | |||||||| | |||| || | || || |||||||| Sbjct 1596865 AGATACTCCCGCTCGGCAGCATCCTTGATGTAAGTGTCGATGAGGAGGGAATACGTCTCG 1596924 Query 75048 GAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGT 75107 || || || || | | |||| || | |||||| |||| ||||| || | ||| Sbjct 1596925 GAGTGGATGTTTTCCATCATAATCTGGAACCCATAGAAACACCGAGCCTCGGCGACCTGA 1596984 Query 75108 ACATCCTTTGAAAAA--TTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGA 75165 || || || ||||| ||| | | |||||| |||| || || || ||||| || | Sbjct 1596985 ACTTCGTTGGAAAAGCGTTCGAGC--AAATTCTCATTGACTATCCCATCGGAGGCAGCAA 1597042 Query 75166 AAAAAGCCAGTACCATTTTGATAAAGTGGCGCTC---ATCGTCAGTGAGTTTGTCCCAAT 75222 | || || || || ||| ||||||||||| |||| | | | |||| ||| | Sbjct 1597043 AGAAGGCGAGGACGTGAGAGATGAAGTGGCGCTCGTTGTCGTTAAGGCGGTTGTTCCAGT 1597102 Query 75223 CCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265 | | || ||| || | || || ||||| | |||||||| Sbjct 1597103 CGTGAAGATCCTTCGAGAGGTCCATTTCCTCCGCTGTCCAGAA 1597145 Score = 104 bits (114), Expect = 3e-17 Identities = 333/509 (65%), Gaps = 16/509 (3%) Strand=Plus/Minus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 |||||||| | ||| || | ||| |||||||| | ||||||||||| | || |||||| Sbjct 1598825 CCTTCATCCCGGCTGATGAGTTCGTTCGAAAATGTGAGGCCAGGCATGAAACCGCGCTTC 1598766 Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAG 74888 |||| ||| || || | | ||| || || ||| || || ||||| ||| || ||| Sbjct 1598765 TTCATCCAGAATATTGAAGCGAACGATCCTGAGAAAAATATACCTTCCACAGCAGCGAAG 1598706 Query 74889 GCGACAAGGCGTTGCGCGAACG----GTGCATCGGAAGTCATCCAAGTCTGAGCCCATTC 74944 |||||||| | || ||| |||| ||| | | | ||||| | | ||||| || Sbjct 1598705 GCGACAAGTCTTTCCGCAAACGTCGACTGC-TTGTCTGCTATCCACCTGAGCGCCCAATC 1598647 Query 74945 AGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTC 75004 || || || |||| | ||| | || || || || | || ||| | ||| || Sbjct 1598646 GGCCTTGCGCTTGATGGAAGGAATTGTTTCAATAGCGTCAAACAGGAGAGTTCGCTCGTC 1598587 Query 75005 GGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTT 75064 ||||| ||| | ||||| | | ||||| |||||||| || | || | Sbjct 1598586 CGGATCTCTGATATAGGTATCAATGAGCAACGAGTAGGTCTCCGAGTGTACGTTTTCTAT 1598527 Query 75065 GAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAA--A 75122 | | || | | ||||| | |||||||| || | ||| || || || ||||| Sbjct 1598526 CATGGTTTGAAAACCATAGAAGCAACGCGCCTCAGCCACCTGAACCTCGTTGGAAAACCG 1598467 Query 75123 TTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATT 75182 |||| ||| || || | |||||||| || ||||| |||||||| ||||| || Sbjct 1598466 TTCA--ACGAGGTTTTCGTTAACGATGCCATCAGAGGCAGCGAAAAAGGCCAGAACATGA 1598409 Query 75183 TTGATAAAGTGGCGCTC-ATCGTCAG-TGAGT---TTGTCCCAATCCTTCAGGTCCCCCG 75237 ||| || | || || ||| || ||||| |||| ||| ||| | ||||| || Sbjct 1598408 GAGATGAAATATCGTTCGTTCG--AGTTGAGTTTGTTGTTCCAGTCCATGAGGTCATGCG 1598351 Query 75238 CCAAATCAATCTCCTCGACCGTCCAGAAA 75266 || ||| || ||||| | ||||| ||| Sbjct 1598350 ACAGATCTATTTCCTCTGCAGTCCAAAAA 1598322 Score = 86.0 bits (94), Expect = 7e-12 Identities = 129/181 (71%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 74457 TTTGAATAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTC 74516 || ||||| || ||||||||| ||||||||||||||||| |||| ||| ||||| | Sbjct 1599193 TTCGAATATTCCGAGACCCGCTTCTCAAAAAAGTTGGTCTTTCCTTGCAAGGAGATCATG 1599134 Query 74517 TCCATCCAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTC-TCCCCAAACTGTGCCAT 74575 ||||| |||| |||||||| | || |||| || | ||| | |||| ||| Sbjct 1599133 TCCATGAAGTCAAAAGGGTTTTGTGAGCCGT-AACATTTTTCATTGCCAAGGGACACCAG 1599075 Query 74576 GAGGCGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAG 74635 ||| || || || || |||| |||||||| ||| ||||| ||| |||||||| Sbjct 1599074 GAGTCGGTCAGCAACGAATTCGATGTACTGGCACATGAGCTTCGCATTCATACCGATGAG 1599015 Query 74636 T 74636 | Sbjct 1599014 T 1599014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547213906898800