Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq5 132 4e-26 seq18 100 2e-16 >seq5 Length=1591901 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || ||||| || || || ||| | || ||||| || || || | || Sbjct 947976 CATGCAGATCTTCGTCAAAACCCTTACTGGGAAGACGATCACTCTCGAGGTTGAGTCATC 947917 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | ||||| || ||||| |||||||||||||| || |||||||| Sbjct 947916 CGATACCATTGATAATGTCAAGGCGAAGATTCAGGACAAAGAAGGCATTCCCCCCGATCA 947857 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| ||| | || | ||| ||||| || | || ||| | || ||||||| || || Sbjct 947856 ACAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCCGACTATAA 947797 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||||||||| | ||| | || | ||| |||| || ||||| Sbjct 947796 TATTCAGAAGGAGTCGACTCTTCATCTCGTCCTTCGTCTGCGCGGAGGCAT 947746 >seq18 Length=860724 Score = 100 bits (110), Expect = 2e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| || || || ||| | ||||| || || || || ||||| Sbjct 790115 ATGCAAATTTTCGTCAAAACGCTCACTGGGAAGACGATTACCCTCGAGGTCGAGTCGTCC 790174 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || ||||||| | ||||| || || || ||||| |||||||| || || || || Sbjct 790175 GATACGATTGACAACGTCAAGGCGAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCAG 790234 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||| || || || | || ||| | ||| | || || |||||| Sbjct 790235 CAGCGCTTGATCTTCGCTGGTAAGCAGCTTGAGGACGGGCGGACGCTCTCGGACTACAAC 790294 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGG 27195 ||||| |||||| ||| | || |||| Sbjct 790295 ATTCAGAAGGAGAGCACCCTGCACTTGG 790322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434916736437120