Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq42 93.3 4e-14 >seq42 Length=396757 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34265 GAGGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGG 34324 |||||||||||||||||| | || | ||| || | | | ||| || ||| Sbjct 67764 GAGGAGCTGCTGTGGTTCATCCACGGCTCGACGGACTCGACGCTCCTCACGAAGAAGGGC 67823 Query 34325 GTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATC- 34383 || ||||||||||||| ||||||| || | ||||||||| ||| |||| |||| Sbjct 67824 GTCAAGATCTGGGACGGGAACGGGTCGCGCGCGTTTCTGGAC-AGCAGGGGGCTGCATCA 67882 Query 34384 TCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGA 34443 || ||||||||| || ||||| || || || || |||||| | || ||||| || || Sbjct 67883 CCGCCGGGAGGGCGATTTAGGCCCCGTATATGGCTTTCAGTGGCGGCATTTTGGTGCAGA 67942 Query 34444 GTATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGC 34493 |||| || | || | ||||| |||| | || | ||| ||||||| Sbjct 67943 GTATGTGGATTGTGATACAGACTACACGGGCAAAGGGGTGGATCAGCTGC 67992 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 6852 GCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAA 6911 ||||||| ||| | || | |||| ||||| | || | || |||||| || |||| Sbjct 67992 GCAGCTGATCCACCCCTTTGCCCGTGTAGTCTGTATCACAATCCACATACTCTGCACCAA 67933 Query 6912 AGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGA-GATGGGAAC 6970 | || | |||||| || || || || ||||| || ||||||||| || |||| | Sbjct 67932 AATGCCGCCACTGAAAGCCATATACGGGGCCTAAATCGCCCTCCCGGCGGTGATGCAGCC 67873 Query 6971 CCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGAC 7030 ||| ||| ||||||||| | || ||||||| ||||||||||||| || ||| | Sbjct 67872 CCCTGCT-GTCCAGAAACGCGCGCGACCCGTTCCCGTCCCAGATCTTGACGCCCTTCTTC 67814 Query 7031 GAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTC 7080 | ||| | | | || ||| | || | |||||||||||||||||| Sbjct 67813 GTGAGGAGCGTCGAGTCCGTCGAGCCGTGGATGAACCACAGCAGCTCCTC 67764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448260685396320