Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq18 167 5e-36 seq5 158 3e-33 seq8 89.7 1e-12 seq33 87.8 4e-12 seq7 87.8 4e-12 seq4 87.8 4e-12 seq15 86.0 1e-11 seq3 84.2 5e-11 >seq18 Length=860724 Score = 167 bits (184), Expect = 5e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || ||||||||||| || ||||| || |||||||| || || | || || Sbjct 789831 ACGAAGACGAAGAACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCTGAGAGTGT 789772 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 || || ||||| |||||||| || ||||| || || ||||||||||| || || | || Sbjct 789771 CCGCCCGTCTTCGAGCTGCTTTCCGGCGAAAATGAGACGTTGTTGGTCGGGGGGGATGCC 789712 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||| ||||| || ||||| ||||||||||| || || || ||||| Sbjct 789711 CTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATGGTGTCCGATGACTCGACTTCGAG 789652 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || ||||| ||||| || || | |||||| Sbjct 789651 GGTGATGGTCTTGCCAGTGAGTGTCTTGACGAAGATCTGCAT 789610 Score = 165 bits (182), Expect = 2e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 || ||||| |||||||| || ||||| || || || | || || | ||||||||||| Sbjct 789538 AGATGAAGTGTGGACTCCTTCTGGATATTGTAGTCGGAGAGAGTGCGACCATCTTCCAGT 789479 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 ||||| || || ||||| |||||||||||||||||||| | || ||||||||||| ||| Sbjct 789478 TGCTTACCCGCAAAGATCAGGCGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATC 789419 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 || || ||||| ||||||||||| || || || ||||| ||||| |||||||| Sbjct 789418 TTGGCCTTGACGTTGTCGATGGTGTCCGACGACTCGACTTCGAGGGTGATGGTCTTTCCA 789359 Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || || | ||||| Sbjct 789358 GTGAGTGTCTTAACGAATATTTGCAT 789333 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 || || ||||||||||| || || |||||||| || | || || | ||||| || ||| Sbjct 790043 AGATGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGATAGAGTGCGCCCATCCTCAAGC 789984 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 |||||||| || ||||| || || || ||||| || |||| || || |||||||| ||| Sbjct 789983 TGCTTGCCAGCAAAGATCAGACGCTGCTGGTCGGGCGGAATGCCCTCTTTGTCCTGAATC 789924 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 ||| || ||||| ||||| ||||| || |||||||| || || || ||||| || Sbjct 789923 TTTGCCTTGACGTTGTCGATAGTGTCCGACGACTCAACCTCAAGGGTAATAGTCTTCCCA 789864 Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || | |||||| Sbjct 789863 GTAAGCGTCTTCACGAAAATCTGCAT 789838 Score = 129 bits (142), Expect = 1e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| || ||| ||| || || ||||| || |||| || |||| || || || ||||| Sbjct 790318 GTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGCGTCCGCCCGTCCTCAAGCTG 790259 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || |||||||| | ||| || |||||||| || | |||||||||||||||||||| Sbjct 790258 CTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTT 790199 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || ||||| || || || || || || |||||||| || |||||||| || || Sbjct 790198 CGCCTTGACGTTGTCAATCGTATCGGACGACTCGACCTCGAGGGTAATCGTCTTCCCAGT 790139 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 ||| || || || || | ||||| Sbjct 790138 GAGCGTTTTGACGAAAATTTGCAT 790115 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 ||||||||||| |||||||| || ||||| ||||| ||||||||| |||||||| Sbjct 789155 CCTTCCTTGTCTTGGATCTTAGCCTTGACGTTGTCGATTGTGTCAGAGGACTCAACCTCA 789096 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| || || | |||||| || || | |||||| Sbjct 789095 AGGGTGATGGTCTTGCCGGTCAAAGTCTTCACGAAGATCTGCAT 789052 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| || ||||| || || || || ||||| | || || | ||| ||| Sbjct 789316 AGCACGAGGTGAAGCGTAGACTCCTTCTGAATATTGTAATCAGATAGTGTGCGTCCGTCT 789257 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || ||||| ||||| |||||||| || ||||||||||| ||||| Sbjct 789256 TCAAGCTGTTTGCCAGCGAAGATCAGTCGTTGTTGGTCGGGAGG 789213 >seq5 Length=1591901 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || |||||||| ||||| || || || ||||| || | ||| || | || || Sbjct 947764 AGGACGAGATGAAGAGTCGACTCCTTCTGAATATTATAGTCGGAAAGAGTACGGCCGTCC 947823 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || |||||||| || || |||| ||||| |||||| Sbjct 947824 TCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGATCGGGGGGAATGCCTTCTTTGTCC 947883 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || || ||||| || || ||||||||||||||||||||| Sbjct 947884 TGAATCTTCGCCTTGACATTATCAATGGTATCGGATGACTCAACCTCGAGAGTGATCGTC 947943 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || || || || | |||||| Sbjct 947944 TTCCCAGTAAGGGTTTTGACGAAGATCTGCAT 947975 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 || ||||| ||| |||||| ||||| || ||||| | | || | ||| ||||| ||| Sbjct 947542 AGATGAAGGGTGCTCTCTTTCTGGATATTGTAATCTGACAATGTACGTCCGTCTTCTAGC 947601 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 ||||| || || || ||||||||||| || || ||||||| ||||| || ||||||||| Sbjct 947602 TGCTTTCCAGCAAAAATAAGGCGTTGCTGATCGGGAGGAATCCCTTCTTTATCCTGGATC 947661 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 || ||||||||| || || ||||| || || ||||| | ||||| ||||| ||| Sbjct 947662 TTCGCTTTCACGTTGTCAATAGTGTCGGATGACTCGACCTCCAACGTGATGGTCTTGCCC 947721 Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114 || | ||||| ||||| | |||||| Sbjct 947722 GTCAACGTCTTGACAAAGATCTGCAT 947747 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || || || |||||||| || ||||| ||||| | ||| || | || || Sbjct 947992 AGAACGAGATGGAGGGTAGACTCTTTCTGAATGTTGTAATCAGAAAGTGTGCGGCCGTCC 948051 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || ||||||||||| ||||||||||| ||||| ||||||||||| Sbjct 948052 TCGAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGGTCAGGAGG 948095 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 ||||| ||||| || ||||| || || || |||||||| || ||| ||||||||| Sbjct 948154 CCTTCTTTGTCTTGAATCTTGGCCTTGACATTATCGATGGTATCCGAGGACTCAACCTCG 948213 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || ||||| |||||||| ||||||||||| || || | ||||||| Sbjct 948214 AGCGTGATGGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCATT 948258 >seq8 Length=1449076 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || |||||||| ||||| ||||| || || ||||| | ||||| Sbjct 782494 AGGACCAAGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCGCTGAGGGTGCGGCCATCC 782553 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || ||||||||||| |||||||| ||||| || ||||| ||||| Sbjct 782554 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGAGG 782597 >seq33 Length=576204 Score = 87.8 bits (96), Expect = 4e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||| ||||| ||||||||||| || |||||||| || || | || || | ||||| Sbjct 136122 AGGATGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCAACCATCC 136181 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAG 211005 || |||||||| | |||||||| || ||||||||||||| || Sbjct 136182 TCAAGCTGCTTTCTGGCGAAGATCAGTCGTTGTTGGTCAGAAG 136224 >seq7 Length=1492718 Score = 87.8 bits (96), Expect = 4e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||| ||||| ||||||||||| || |||||||| || || | || || | ||||| Sbjct 957535 AGGATGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCAACCATCC 957476 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAG 211005 || |||||||| || |||||||| || | ||||||||||| || Sbjct 957475 TCAAGCTGCTTTCCGGCGAAGATCAGTCATTGTTGGTCAGAAG 957433 >seq4 Length=1617472 Score = 87.8 bits (96), Expect = 4e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||| ||||| ||||||||||| || |||||||| || | | || || | ||||| Sbjct 70339 AGGATGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTTGGAGAGAGTGCAACCATCC 70280 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAG 211005 || |||||||| || |||||||| || ||||||||||||| || Sbjct 70279 TCAAGCTGCTTTCCAGCGAAGATCAGTCGTTGTTGGTCAGAAG 70237 >seq15 Length=1191322 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 |||||||| ||||| || || ||| ||||| ||||||||||| || || |||||| Sbjct 976164 CCTTCCTTATCCTGAATTTTGGCTTTAACGTTGTCGATGGTGTCCGACGACTCCACCTCG 976105 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || |||||||| |||||||| ||||| || || | ||||| || Sbjct 976104 AGGGTAATCGTCTTCCCCGTGAGGGTCTTGACGAAGATTTGCATCTT 976058 >seq3 Length=1723946 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 |||||||||||||| |||||| |||||||| ||||||||||| ||| ||||| ||| Sbjct 236442 CCTTCCTTGTCCTGAATCTTTGCCTTCACGTTGTCGATGGTGTCGGAGGACTCAACTTCG 236501 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | | | || ||||| | || || ||||| ||||| | ||||| Sbjct 236502 AAATTTATTGTCTTGCTGGTAAGGGTCTTCACAAAGATTTGCAT 236545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159147455399690