Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq5 138 3e-27 seq18 125 2e-23 seq4 93.3 1e-13 seq23 91.5 4e-13 seq24 89.7 1e-12 seq7 89.7 1e-12 seq33 84.2 5e-11 >seq5 Length=1591901 Score = 138 bits (152), Expect = 3e-27 Identities = 136/176 (77%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 225523 TCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAG 225582 ||||| |||| ||||||||| | ||| || | || |||||||||||||| ||||| || Sbjct 947557 TCTTTCTGGATATTGTAATCTGACAATGTACGTCCGTCTTCTAGCTGCTTTCCAGCAAAA 947616 Query 225583 ATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCT 225642 ||||| ||||| || ||||| ||||| ||||| || || |||||||| ||||| Sbjct 947617 ATAAGGCGTTGCTGATCGGGAGGAATCCCTTCTTTATCCTGGATCTTCGCTTTCACGTTG 947676 Query 225643 TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTT 225698 || || ||||| || | || || || |||||||| |||||||||||||| || || Sbjct 947677 TCAATAGTGTCGGATGACTCGACCTCCAACGTGATGGTCTTGCCCGTCAACGTCTT 947732 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || || ||||| || || || || | ||| || |||| | ||| | || || Sbjct 947764 AGGACGAGATGAAGAGTCGACTCCTTCTGAATATTATAGTCGGAAAGAGTACGGCCGTCC 947823 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || |||||||| ||||| ||||| ||||| ||||| Sbjct 947824 TCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGATCGGGGGGAATGCCTTCTTTGTCC 947883 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| || ||||| || || | || || || | ||||||||| Sbjct 947884 TGAATCTTCGCCTTGACATTATCAATGGTATCGGATGACTCAACCTCGAGAGTGATCGTC 947943 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||||| | ||| | ||||| Sbjct 947944 TTCCCAGTAAGGGTTTTGACGAAGATCTGCAT 947975 >seq18 Length=860724 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || |||||||| || || || || || |||| ||||| || | | || Sbjct 789831 ACGAAGACGAAGAACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCTGAGAGTGT 789772 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||| ||||| |||||||| || ||||| || || |||||||||||||| || || || Sbjct 789771 CCGCCCGTCTTCGAGCTGCTTTCCGGCGAAAATGAGACGTTGTTGGTCGGGGGGGATGCC 789712 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || ||||| ||| || ||||||||||| || | || || || | Sbjct 789711 CTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATGGTGTCCGATGACTCGACTTCGAG 789652 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | || || | ||| | ||||| Sbjct 789651 GGTGATGGTCTTGCCAGTGAGTGTCTTGACGAAGATCTGCAT 789610 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 225508 AGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGC 225567 || || || ||||| || || |||| |||||| |||| | ||| | |||||||| || Sbjct 789538 AGATGAAGTGTGGACTCCTTCTGGATATTGTAGTCGGAGAGAGTGCGACCATCTTCCAGT 789479 Query 225568 TGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATC 225627 ||||| || || ||||| || ||||||||||| || || || || |||||||| || ||| Sbjct 789478 TGCTTACCCGCAAAGATCAGGCGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATC 789419 Query 225628 TTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCC 225687 || ||| || ||||||||||| || | || || || | ||||| ||||| || Sbjct 789418 TTGGCCTTGACGTTGTCGATGGTGTCCGACGACTCGACTTCGAGGGTGATGGTCTTTCCA 789359 Query 225688 GTCAAAGTTTTTATGAACACTTGCAT 225713 || | || || | ||| | |||||| Sbjct 789358 GTGAGTGTCTTAACGAATATTTGCAT 789333 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 225508 AGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGC 225567 || ||||||||||| || || || | || || || | | ||| | |||||| || ||| Sbjct 790043 AGATGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGATAGAGTGCGCCCATCCTCAAGC 789984 Query 225568 TGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATC 225627 ||||| ||||| ||||| || || || |||||||||||||| || || ||||| || ||| Sbjct 789983 TGCTTGCCAGCAAAGATCAGACGCTGCTGGTCGGGCGGAATGCCCTCTTTGTCCTGAATC 789924 Query 225628 TTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCC 225687 ||| ||| || ||||| ||||| || | || || || | || || ||||| || Sbjct 789923 TTTGCCTTGACGTTGTCGATAGTGTCCGACGACTCAACCTCAAGGGTAATAGTCTTCCCA 789864 Query 225688 GTCAAAGTTTTTATGAACACTTGCAT 225713 || | || || | ||| | ||||| Sbjct 789863 GTAAGCGTCTTCACGAAAATCTGCAT 789838 Score = 89.7 bits (98), Expect = 1e-12 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 ||| || || |||||||| ||||||||||| | || || ||||| || || || ||||| Sbjct 790273 CCCGTCCTCAAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATGCCTTC 790214 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 |||||| |||||||| ||| || || || || || || | || || || | || Sbjct 790213 CTTGTCCTGGATCTTCGCCTTGACGTTGTCAATCGTATCGGACGACTCGACCTCGAGGGT 790154 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||| || || | ||||| | ||| | |||||| Sbjct 790153 AATCGTCTTCCCAGTGAGCGTTTTGACGAAAATTTGCAT 790115 >seq4 Length=1617472 Score = 93.3 bits (102), Expect = 1e-13 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||||| |||||||||||||| || || |||| ||||| | || | ||| | ||||| Sbjct 70340 CAGGATGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTTGGAGAGAGTGCAACCATC 70281 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTC 225599 || |||||||| ||||||||||| |||||||||||||| Sbjct 70280 CTCAAGCTGCTTTCCAGCGAAGATCAGTCGTTGTTGGTC 70242 >seq23 Length=668295 Score = 91.5 bits (100), Expect = 4e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||| |||||||| ||||| || || |||| |||||||||| | ||| | ||||| Sbjct 509391 AGGATGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCC 509332 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTC 225599 || |||||||| ||||||||||| |||||||| ||||| Sbjct 509331 TCAAGCTGCTTTCCAGCGAAGATCAGTCGTTGCTGGTC 509294 >seq24 Length=636752 Score = 89.7 bits (98), Expect = 1e-12 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||||| |||||||||||||| || || |||| ||||| |||| | ||| | ||||| Sbjct 199831 CAGGATGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCAACCATC 199890 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTC 225599 || |||||||| ||||| ||||| ||| |||||||||| Sbjct 199891 CTCAAGCTGCTTTCCAGCAAAGATCAGTTGTTGTTGGTC 199929 >seq7 Length=1492718 Score = 89.7 bits (98), Expect = 1e-12 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||||| |||||||||||||| || || |||| ||||| |||| | ||| | ||||| Sbjct 957536 CAGGATGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCAACCATC 957477 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTC 225599 || |||||||| || |||||||| |||| ||||||||| Sbjct 957476 CTCAAGCTGCTTTCCGGCGAAGATCAGTCATTGTTGGTC 957438 >seq33 Length=576204 Score = 84.2 bits (92), Expect = 5e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||||| |||||||||||||| || || |||| ||||| |||| | || | ||||| Sbjct 136121 CAGGATGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCAACCATC 136180 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTC 225599 || |||||||| | |||||||| |||||||||||||| Sbjct 136181 CTCAAGCTGCTTTCTGGCGAAGATCAGTCGTTGTTGGTC 136219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192526524532364