Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20shimeji_20[genbank_20GCA_5F001950515.1_202016-12-09] 306 sequences; 52,434,773 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1 131 1e-25 >seq1 Length=2076502 Score = 131 bits (144), Expect = 1e-25 Identities = 364/552 (66%), Gaps = 11/552 (2%) Strand=Plus/Plus Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607 || |||||||| ||||| || || || | |||||| || || || || || ||||| Sbjct 1596622 CATGCAAAATCGGTATGCATGCCCTCATCACGGCTAATGAGCTCATTGGAGAAGGTTAAG 1596681 Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAAT 4667 || ||||| | ||| | || || | ||| || || | ||||||||| || || ||||| Sbjct 1596682 CCAGGCATGAGACCGCGTTTCTTCATCCAGAAGATGGAGGCAAATGATCCTGAGAAGAAG 1596741 Query 4668 ATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAA---CGAGCTGGCTTTGTCT 4724 || ||||| || |||||||| || || | || |||| |||| || | ||| Sbjct 1596742 ATACCTTCAACAGCGGCAAAGGCAACGAGACGTTCGGCGAAAGTCGAG-TGTCG--GTCA 1596798 Query 4725 TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784 |||||| | | ||||| | || || ||||| | ||| || || || | | || Sbjct 1596799 GCAATCCACCTGAGAGCCCATTCCGCCTTCTTCTTGATGCAAGGGATGGTCTCAACGGCA 1596858 Query 4785 TTAAATAATTTACTTTTT-TCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843 | || | | ||| || | || | || |||||||| || || ||| ||| Sbjct 1596859 TCGAACAGAT-ACTCCCGCTCGGCAGCATCCTTGATGTAAGTGTCGATGAGGAGGGAATA 1596917 Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGT 4903 | | || || || || ||||| || |||||| || || || || || | ||| || | Sbjct 1596918 CGTCTCGGAGTGGATGTTTTCCATCATAATCTGGAACCCATAGAAACACCGAGCCTCGGC 1596977 Query 4904 TACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963 || ||||||||||| |||| | ||| | || || || || ||||| || || ||| Sbjct 1596978 GACCTGAACTTCGTTGGAAAAGCGTTCGAGCAAATTCTCATTGACTATCCCATCGGAGGC 1597037 Query 4964 TGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAA---GTTTTTT 5020 ||||| || || | || ||||| || |||| | |||| |||| | || || Sbjct 1597038 AGCAAAGAAGGCGAGGACGTGAGAGATGAAGTGGCGCTCGTTGTCGTTAAGGCGGTTGTT 1597097 Query 5021 CCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 ||||| | | | ||| || | | || | ||| || | ||||| ||||| ||||| || Sbjct 1597098 CCAGTCGTGAAGATCCTTCGAGAGGTCCATTTCCTCCGCTGTCCAGAACGAAGCTTCAGC 1597157 Query 5081 TTTTTTGTACAT 5092 || || ||||| Sbjct 1597158 CTTCTTATACAT 1597169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427048007371898