Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq201019 102 2e-16 seq204124 96.9 7e-15 >seq201019 Length=96896 Score = 102 bits (112), Expect = 2e-16 Identities = 123/165 (75%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 230446 CTTATTGGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504 || ||||||||||| || || ||| ||| | || ||||| ||||| || || ||||| | Sbjct 29658 CTGATTGGCATGAATGC-GACCTTGATGTGCCAATACATTGAATTTGTCGCAGACCGTCT 29716 Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564 ||| || | ||||| | || || || || ||||| | ||||||||| | || ||||| Sbjct 29717 TTTGGTGTCGCTTGGAAATGACAAGGTCTATAACTCAACGAACCCCTTCGACTTCATGGA 29776 Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGT 230609 | || ||||| ||||| || || ||||| |||||||| || || Sbjct 29777 CATGATCTCGCTCCAAGGCAAAACGAACTTTTTCGAAAAACGCGT 29821 >seq204124 Length=22413 Score = 96.9 bits (106), Expect = 7e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 230449 ATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTT 230508 |||||||||||||| || ||| | || ||||| || || ||||| || ||| | | Sbjct 6873 ATTGGCATGAACGCGACCCTCATGTGCCAATACATTGAGTTTGTAGCTGATCGCCTGCTG 6932 Query 230509 GTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTC 230568 || | | || |||| |||||||| || || | || || |||| |||||||| | Sbjct 6933 GTCTCGTTGGGCAACGATAAAGTGTATAATTCGACCAATCCGTTTGATTTTATGGATATG 6992 Query 230569 ATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGT 230609 || ||||| ||||| ||||||||||| ||||| ||||| || Sbjct 6993 ATATCGCTCCAAGGCAAGACCAACTTTTTCGAGAAGCGCGT 7033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1055052227408040