Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq202667 91.5 2e-13 >seq202667 Length=5513 Score = 91.5 bits (100), Expect = 2e-13 Identities = 171/246 (70%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCC 146049 || || | ||| || |||||||| || || ||||| | | | | || ||| | || Sbjct 3522 TCTCTCAACTGATCAACGCCCTGACCTCGATAATCCGCATCGCAATCTTTATACTCCGCG 3463 Query 146050 CCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTG-TGCCC 146108 |||||||| | |||||| || ||||| ||||| || || || || ||| | || || Sbjct 3462 CCGAAGTGTCGCCACTGAAAGCCGTATACGGGACCAAGATCGCCCT-CTCGTCGATGTCC 3404 Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCT 146168 || ||| | ||||||| ||| | ||||| ||||||| |||||||||||| | Sbjct 3403 CAATCCGCGCTTCTCGAGGAATTCCTTGCTGCCGTTCCCGTCCCAAATCTTGACGCCCTT 3344 Query 146169 CGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTG-ATGAACCAGAGCAGCTCTTCGAGGA 146227 | | ||||| | || |||||||| | | || || | |||||| || | |||||| | || Sbjct 3343 CTCTGAGAGTTTTTTAGAGTCCGTCG-CGCCTTGTACGAACCAAAGTAACTCTTCAATGA 3285 Query 146228 CCCCCC 146233 |||| Sbjct 3284 TTCCCC 3279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588568357172320