Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq204495 104 2e-17 >seq204495 Length=136544 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | |||||||||||| || || || ||||| | Sbjct 14674 CCGCCACGGAGACGGAGGACGAGGTGAAGAGTGGACTCCTTCTGGATATTGTAGTCGGAA 14733 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| | ||||||| || |||||||| ||| | || | | ||||| || || Sbjct 14734 AGAGTTCGTCCGTCCTCGAGTTGTTTGCCGGCAAAGATCAAGCGTTGCTGATCGGGAGGA 14793 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| ||||||| |||||| | | ||| |||||| | || Sbjct 14794 ATGCCTTCCTTGTCTTGGATCTTTGCTTTCACGTTGTCGATAGTATCGGATGATTCGACC 14853 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || |||||||| ||||| | ||| || || || |||||||| Sbjct 14854 TCCAACGTGATGGTCTTCCCGGTGAGCGTCTTCACGAAAATTTGCAT 14900 Score = 82.4 bits (90), Expect = 6e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 21021 TCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTG 21080 ||||| ||||| ||||| ||| | ||||| | |||||| || ||| | ||| |||||| Sbjct 14518 TCCTCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGATCGGGGGGAATGCCCTCCTTG 14577 Query 21081 TCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATG 21140 || |||||| ||||| | | ||| || || | ||| |||| ||| ||| Sbjct 14578 TCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGACGACTCTACCTCCAAGGTGATG 14637 Query 21141 GTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||| || ||||| || ||||| || ||||| Sbjct 14638 GTCTTGCCTGTCAACGTCTTCACAAAAATCTGCAT 14672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421206743751728