Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq204495 104 2e-17 seq204496 95.1 1e-14 seq203715 91.5 1e-13 seq203754 89.7 4e-13 >seq204495 Length=136544 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||||||||| || || || |||| || |||||||||||||| || |||||||||||| Sbjct 14518 TCCTCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGATCGGGGGGAATGCCCTCCTTG 14577 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || || || || || | |||| |||||||| ||| ||||| | ||| | Sbjct 14578 TCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGACGACTCTACCTCCAAGGTGATG 14637 Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| |||| || || |||||||||||||| Sbjct 14638 GTCTTGCCTGTCAACGTCTTCACAAAAATCTGCAT 14672 Score = 96.9 bits (106), Expect = 3e-15 Identities = 144/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || || ||||| ||| | ||| || |||||||| ||||| || Sbjct 14704 GTGGACTCCTTCTGGATATTGTAGTCGGAAAGAGTTCGTCCGTCCTCGAGTTGTTTGCCG 14763 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| | || |||||||||||||| ||||| ||||||||| || ||| ||| Sbjct 14764 GCAAAGATCAAGCGTTGCTGATCGGGAGGAATGCCTTCCTTGTCTTGGATCTTTGCTTTC 14823 Query 118662 ACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720 || | |||| || || | || | |||||||| | || | || || ||||| || || Sbjct 14824 ACGTTGTCGATAGTATCGGATGAT-TCGACCTCCAACGTGATGGTCTTCCCGGTGAGCGT 14882 Query 118721 TTTTACAAAAATCTGCATGGCT 118742 || || ||||| |||||| || Sbjct 14883 CTTCACGAAAATTTGCATGCCT 14904 >seq204496 Length=81202 Score = 95.1 bits (104), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| || | || ||||| ||||||||||| || ||||||| |||||| |||||| Sbjct 37342 CACCAAATGAAGAGTCGACTCCTTTTGAATGTTATAGTCGCTCAAAGTGCGACCATCCTC 37401 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 || || || || ||| ||||||||||||| || ||||| || |||| Sbjct 37402 CAGTTGCTTGCCCGCGAAGATGAGACGCTGTTGGTCGGGTGGGATGC 37448 >seq203715 Length=28578 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 132878 GTCGACGGTAAACTTTGTGGCCTGAGCGGCGGGTTTTGTGCGCAAATAATACATGCCCGT 132937 |||||||||||||| |||||||||| ||||| |||||||| ||| ||||| || || Sbjct 24429 GTCGACGGTAAACTGGATGGCCTGAGCAGCGGGCCGTGTGCGCAGATAGTACATTCCAGT 24370 Query 132938 TTTCAGTTTTTTCTCCCACGCGTAAAAGTGTATGCTCG 132975 ||| || ||||| |||| |||| ||||| ||||||| Sbjct 24369 TTTAAGACCTTTCTTCCACCCGTAGAAGTGCATGCTCG 24332 >seq203754 Length=64599 Score = 89.7 bits (98), Expect = 4e-13 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||||||||||||||| || ||||||| || || |||||| ||||||||||| Sbjct 436 GTCGACTCTTTTTGAATGTTATAGTCGCTCAATGTTCGGCCATCCTCAAGCTGTTTTCCC 377 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 ||| | ||||||||||| || || || || |||| Sbjct 376 GCGAAAATGAGACGCTGTTGGTCCGGGGGGATGC 343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432749103215536