Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq204495 102 5e-17 >seq204495 Length=136544 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || || ||||| | ||| || ||||| || ||||||||||| Sbjct 14674 CCGCCACGGAGACGGAGGACGAGGTGAAGAGTGGACTCCTTCTGGATATTGTAGTCGGAA 14733 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | || ||||| || || || | || ||||| ||| || Sbjct 14734 AGAGTTCGTCCGTCCTCGAGTTGTTTGCCGGCAAAGATCAAGCGTTGCTGATCGGGAGGA 14793 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||||| ||| |||||||| | | | | || | ||||| |||||||| Sbjct 14794 ATGCCTTCCTTGTCTTGGATC-TTTGCTTTCACGTTGTCGATAGTATCGGATGATTCGAC 14852 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||||||| || |||||||| || ||||| || || ||||| Sbjct 14853 CTCCAACGTGATGGTCTTCCCGGTGAGCGTCTTCACGAAAATTTGCAT 14900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322266762020480