Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq204124 125 7e-24 >seq204124 Length=22413 Score = 125 bits (138), Expect = 7e-24 Identities = 375/572 (66%), Gaps = 15/572 (3%) Strand=Plus/Minus Query 14195 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 14254 |||| | ||| |||||||| || | ||| || || | || || | ||||| ||| Sbjct 6702 AAAAGCAGACAAGCAAAATCCGTGTGCATGCCTTCGTCCCGGCTGATCAACTCGTTGGAA 6643 Query 14255 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG 14314 || || | ||||||||||| || || || || | ||| || || | || || |||||| Sbjct 6642 AAGGTAAGACCTGGCATCAAACCACGCTTCTTCATCCAGAAAATAGACGCAAAAGATCCG 6583 Query 14315 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTT 14374 |||||||| || |||||||| || || || || | | |||||||| || | | | | Sbjct 6582 GAAAAGAAGATGCCCTCAACAGCGGCGAAAGCGACGAGACGTTCTCCGAATGTCGAGTCT 6523 Query 14375 TTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCA 14434 |||| |||||||| || ||||| || | || ||| || | || || || Sbjct 6522 TTGTCGGATATCCAATTGAGTGCCCAGTCGGCCTTGCGTTTGATGCATGGGATGGTCTCG 6463 Query 14435 ATAGCATTAAATAAATGTT--CCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTA 14492 | ||| | ||| | | | | ||| | || |||| ||||| ||||| || || Sbjct 6462 ACAGCGTCAAAGAGGTACTCGCGTTCGGCTGGGTCCTTG--ATGTACGTATCGATGAG-G 6406 Query 14493 AGCTA-TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTA 14551 ||| | || | || || || ||||||||||| || || || ||||| ||||| | Sbjct 6405 AGCGAGTATGTCTCCGAATGGATGTTTTCCATCATGATTTGGAAGCCATAGAAACACCGT 6346 Query 14552 GCTTCTGACCATTGTACCTC---TGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATA 14608 || || | ||| || || |||| || | ||| ||| ||| || || || || Sbjct 6345 GCCTCGGCAGCTTGAACTTCGTTTGAG---AAGCGCTCGACCAGATTCTCGTTGACAATC 6289 Query 14609 CCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTG 14668 || ||| ||| || ||||| || || | || |||||||| | || | | | || Sbjct 6288 CCGTCAGAAGCGGCGAAAAAGGCTAAAACGTGAGAAATAAAGTGGCGTTCGTTGTCGTTG 6229 Query 14669 AGT---TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAA 14725 ||| ||| |||| ||| | ||||| || | || | ||| || | |||||||| Sbjct 6228 AGTTTGTTTGTCCAGTCGTGAAGGTCCTTCGACAAGTCCATTTCCTCTGCAGTCCAAAAC 6169 Query 14726 CTAGCAACAGCTTTTTTATACATTACCCATAT 14757 ||| ||||||| |||||||| |||||| Sbjct 6168 GAAGCTTCAGCTTTCTTATACATCTGCCATAT 6137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481112555825440