Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq204124 203 3e-47 seq201019 181 9e-41 seq204496 95.1 1e-14 seq204495 91.5 1e-13 seq203754 84.2 2e-11 >seq204124 Length=22413 Score = 203 bits (224), Expect = 3e-47 Identities = 386/564 (68%), Gaps = 11/564 (2%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | ||||| || || || ||||| ||||||||||| | || ||| | ||| || Sbjct 6137 ATATGGCAGATGTATAAGAAAGCTGAAGCTTCGTTTTGGACTGCAGAGGAAATGGACTTG 6196 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || ||||| || ||| ||| | ||||| || || | | |||||| Sbjct 6197 TCGAAGGACCTTCACGACTGGACAAACAAACTCAACGACAACGAACGCCACTTTATTTCT 6256 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| || || ||||||||||| || || || ||||| ||||||||| ||||||| | Sbjct 6257 CACGTTTTAGCCTTTTTCGCCGCTTCTGACGGGATTGTCAACGAGAATCTGGTCGAGCGC 6316 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || ||| | ||||| |||| | ||||| | || || || || || ||| | || Sbjct 6317 TTCTCAAACGAAGTTCAAGCTGCCGAGGCACGGTGTTTCTATGGCTTCCAAATCATGATG 6376 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 |||||| | ||||| || | || ||||| ||||||||||||||| | |||||| | | Sbjct 6377 GAAAACATCCATTCGGAGACATACTCGCTCCTCATCGATACGTACATCAAGGACCCAGCC 6436 Query 57867 GAGAAACGTAGA-CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGA 57925 || | || | || || |||| |||| || || || ||| ||||| || Sbjct 6437 GA-ACGCGAGTACCTCTTTGACGCTGTCGAGACCATCCCATGCATCAAACGCAAGGCCGA 6495 Query 57926 GTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATCGC 57982 ||| || |||| ||||| | || || | | || |||| || | || |||| Sbjct 6496 CTGGGCACTCAATTGGAT---ATCCGACAAAGACTCGACATTCGGAGAACGTCTCGTCGC 6552 Query 57983 GTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAA 58042 |||||||| || || || || |||||||| || |||||| | || || |||||||| Sbjct 6553 TTTCGCCGCTGTTGAGGGCATCTTCTTTTCCGGATCTTTTGCGTCTATTTTCTGGATGAA 6612 Query 58043 GAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGG 58102 ||| || || ||||||| || || || ||| |||||||||||| || ||||| || Sbjct 6613 GAAGCGTGGTTTGATGCCAGGTCTTACCTTTTCCAACGAGTTGATCAGCCGGGACGAAGG 6672 Query 58103 TCTCCATACTGATTTTGCGTGCCT 58126 | || || |||||||| || || Sbjct 6673 CATGCACACGGATTTTGCTTGTCT 6696 >seq201019 Length=96896 Score = 181 bits (200), Expect = 9e-41 Identities = 383/567 (68%), Gaps = 17/567 (3%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| || || || || ||||| ||||||| ||| || | ||||| Sbjct 28935 ATATGGCAAATGTACAAGAAAGCGGAGGCTTCGTTCTGGACCGCCGAGGAGATGGACCTT 28994 Query 57630 TCTAAGGATCTGAGCGATTGGGAT--TCCCTCAAA-GAATCTGAGAGAAATTTTATTAAA 57686 || ||||| || ||| ||| | || | ||| || ||| | |||| || Sbjct 28995 TCAAAGGACCTTCACGACTGGAACAATCGTTTAAACGACAACGAGCGGCATTTCATCTCC 29054 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || || || || ||||| || || || |||||||| ||||| ||| | Sbjct 29055 CACGTTCTCGCCTTCTTTGCGGCGTCCGACGGCATAGTCAACGAGAACTTGGTAGAACGT 29114 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || | ||||| |||| | ||||| | ||||| || || || || | || Sbjct 29115 TTCTCTAATGAAGTTCAAGCTGCCGAGGCCCGGTGCTTCTATGGCTTCCAGATCATGATG 29174 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 ||||| | ||||| || | || || || |||||||| || ||| | || ||| | Sbjct 29175 GAAAATATCCATTCCGAGACATACTCCCTCCTCATCGACACCTACATCAAAGACCCAGTG 29234 Query 57867 GAGAAACGTAGA-CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGA 57925 ||| || | | || || | || | ||||| || ||| ||| ||||||||| Sbjct 29235 GAGCG-CGAATATCTTTTTGATGCCGTTGAAACCATTCCCTGTATCAAACGGAAGGCAGA 29293 Query 57926 GTGGTCAATCAAATGGATA------AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAAT 57979 ||| | | || |||||| |||||| |||| || || ||| | || | Sbjct 29294 CTGGGCCTTGAAGTGGATATCCGACAAAAGCTCCACT------TTTGCAGAGCGTCTGGT 29347 Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGAT 58039 |||||| ||||| || ||||| || ||||| |||||| |||||| | || |||||||| Sbjct 29348 CGCGTTTGCCGCTGTTGAAGGGATTTTCTTCTCGGGCTCGTTTGCGTCCATCTTTTGGAT 29407 Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 ||| || || ||||||||||||||||| || || ||| ||| | || ||||| || Sbjct 29408 GAAAAAGCGAGGCCTGATGCCCGGCCTTACTTTCTCCAATGAGCTCATCAGCCGCGATGA 29467 Query 58100 GGGTCTCCATACTGATTTTGCGTGCCT 58126 ||| | || || || ||||| ||||| Sbjct 29468 GGGGATGCACACCGACTTTGCTTGCCT 29494 >seq204496 Length=81202 Score = 95.1 bits (104), Expect = 1e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 31301 CCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATG 31360 || |||||||| |||||||| || ||||| ||||| || |||| || | ||| || Sbjct 37443 CCACCCGACCAACAGCGTCTCATCTTCGCGGGCAAGCAACTGGAGGATGGTCGCACTTTG 37384 Query 31361 AGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| |||||||||||||| || |||||||||||| |||| ||| Sbjct 37383 AGCGACTATAACATTCAAAAGGAGTCGACTCTTCATTTGGTGCTT 37339 >seq204495 Length=136544 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||||||||| ||||| || || || || || ||||| | || || ||| | || Sbjct 14901 CATGCAAATTTTCGTGAAGACGCTCACCGGGAAGACCATCACGTTGGAGGTCGAATCATC 14842 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 ||| | | |||| | || ||| || ||| | |||||||||||| | || ||||| | Sbjct 14841 CGATACTATCGACAACGTGAAAGCAAAGA-TCCAAGACAAGGAAGGCATTCCTCCCGATC 14783 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 |||| || | || || || |||||||| | || ||| ||| | ||| || | Sbjct 14782 AGCAACGCTTGATCTTTGCCGGCAAACAACTCGAGGACGGACGAACTCTTTCCGACTACA 14723 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | || || || || || |||||||| || || || Sbjct 14722 ATATCCAGAAGGAGTCCACTCTTCACCTCGTCCT 14689 >seq203754 Length=64599 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 31301 CCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATG 31360 || || ||||| |||||||| || ||||| || |||||| | || || || || Sbjct 348 CCCCCGGACCAACAGCGTCTCATTTTCGCGGGAAAACAGCTTGAGGATGGCCGAACATTG 407 Query 31361 AGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| ||||||||||||||||| |||||||||||||| || || Sbjct 408 AGCGACTATAACATTCAAAAAGAGTCGACTCTTCATCTCGTCCT 451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444626865063360