Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq203715 109 1e-18 >seq203715 Length=28578 Score = 109 bits (120), Expect = 1e-18 Identities = 175/249 (70%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGC-CGCCTCCTTAAGAGTATCATAAATACCCTCAAT 94850 || |||||||||||| ||| || || | || |||||||| || ||||| || || || Sbjct 22706 CCACCAGCAGTCTTGCTGATCATGGCACAACTT-TTAAGAGTGTCGTAAATTCCTTCTAT 22648 Query 94851 GCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACA 94910 || |||| | || | ||||||||||||| | |||||| | |||||| Sbjct 22647 CGAGTCGTCTTTCATGCAAACAAGGAAGCACGAGCTCATTTGGGGATGGGGTGTTCCGGC 22588 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 ||| || || || || |||||||| || || | | ||||||||| | || || || Sbjct 22587 ATTGAAAAGGGTTGGTGAAGCATGAGTGAAGAACCGTTCCGACATGAGGTTGTAGGTCTC 22528 Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030 || || || | ||| |||||||| || ||||||||||| ||||| ||||| | ||| Sbjct 22527 AACCACGCGTTCTAGGTCGGATCCGTGTATACCGACAGCCACTCGCATCATCATATGCTG 22468 Query 95031 AGGGCGCTC 95039 ||| || || Sbjct 22467 AGGACGTTC 22459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 986991033865140