Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocystidia_20cucumis_20[genbank_20GCA_5F001179725.1_202015-07-08] 204,508 sequences; 46,746,859 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq204124 150 2e-31 seq201019 147 3e-30 >seq204124 Length=22413 Score = 150 bits (166), Expect = 2e-31 Identities = 373/562 (66%), Gaps = 8/562 (1%) Strand=Plus/Minus Query 36154 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 36213 || ||| || ||||| ||| | || ||||| | || || || ||||||||||| || Sbjct 6697 CAGACAAGCAAAATCCGTGTGCATGCCTTCGTCCCGGCTGATCAACTCGTTGGAAAAGGT 6638 Query 36214 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 36273 || || ||||| | |||||||| || | ||| || || |||||||| ||||| ||||| Sbjct 6637 AAGACCTGGCATCAAACCACGCTTCTTCATCCAGAAAATAGACGCAAAAGATCCGGAAAA 6578 Query 36274 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAAC-CGGCACTGTC 36330 ||| || || || || || || || || | || | ||||| || | | | |||| Sbjct 6577 GAAGATGCCCTCAACAGCGGCGAAAGCGACGAGACGTTCTCCGAATGTCGAGTCTTTGTC 6518 Query 36331 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 36390 |||||| || | ||||| |||||||| ||| | || || || ||||| | ||| Sbjct 6517 GGATATCCAATTGAGTGCCCAGTCGGCCTTGCGTTTGATGCATGGGATGGTCTCGACAGC 6458 Query 36391 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATA 36450 | |||||| || | ||| || || | || ||||| || | || || Sbjct 6457 GTCAAAGAGGTACTCGCGTTCGGCTGGGTCCTTGATGTACGTATCGATGAGGAGCGAGTA 6398 Query 36451 CATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGT 36510 | |||||||| |||||||| || ||||| || || |||||||| | ||||||| Sbjct 6397 TGTCTCCGAATGGATGTTTTCCATCATGATTTGGAAGCCATAGAAACACCGTGCCTCGGC 6338 Query 36511 AATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGC 36570 | || ||||| | | || || || | | ||| || || || || |||||| || Sbjct 6337 AGCTTGAACTTCGTTTGAGAAGCGCTCGACCAGATTCTCGTTGACAATCCCGTCAGAAGC 6278 Query 36571 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT----TGGTGTTAGTTTAT 36626 || ||||| || || || || ||||| | |||||| | | ||| |||| Sbjct 6277 GGCGAAAAAGGCTAAAACGTGAGAAATAAAGTGGCGTTCGTTGTCGTTGAGTTTGTTT-G 6219 Query 36627 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 36686 |||| || | | || || || | |||| ||| || | |||||||| || || || | Sbjct 6218 TCCAGTCGTGAAGGTCCTTCGACAAGTCCATTTCCTCTGCAGTCCAAAACGAAGCTTCAG 6159 Query 36687 CCTTTTTATACATATTCCAGAT 36708 | || |||||||| | ||| || Sbjct 6158 CTTTCTTATACATCTGCCATAT 6137 >seq201019 Length=96896 Score = 147 bits (162), Expect = 3e-30 Identities = 371/559 (66%), Gaps = 10/559 (2%) Strand=Plus/Minus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || || || ||| ||| | ||||| || | || || | || ||||| || || || Sbjct 29491 CAAGCAAAGTCGGTGTGCATCCCCTCATCGCGGCTGATGAGCTCATTGGAGAAAGTAAGG 29432 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 |||||||| ||||| |||||||| | |||||| ||||||||||| || || || |||||| Sbjct 29431 CCGGGCATCAGGCCTCGCTTTTTCATCCAAAAGATGGACGCAAACGAGCCCGAGAAGAAA 29372 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCAC---TGTCATGT 36334 || ||||| || || ||||| || | || | |||| || || || | |||| | Sbjct 29371 ATCCCTTCAACAGCGGCAAACGCGACCAGACGCTCTGCAAAAGTGGAGCTTTTGTCGGAT 29312 Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394 |||||||| ||||| || |||||| ||| | ||| || || || || | |||| | Sbjct 29311 ATCCACTTCAAGGCCCAGTCTGCCTTCCGTTTGATACAGGGAATGGTTTCAACGGCATCA 29252 Query 36395 AAGAGATAGtttttttCATTACT--ATCTTTAACATATGTATCAATCAAAAGACTATACA 36452 || ||||| || | ||| ||||| | || || || || | || || Sbjct 29251 AAAAGATA--TTCGCGCTCCACTGGGTCTTTGATGTAGGTGTCGATGAGGAGGGAGTATG 29194 Query 36453 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAA 36512 | || ||||| || ||||| || || || || || ||||| || | ||||||| | Sbjct 29193 TCTCGGAATGGATATTTTCCATCATGATCTGGAAGCCATAGAAGCACCGGGCCTCGGCAG 29134 Query 36513 TCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 36572 || ||||| || | || |||||| | || || || || ||||| ||||| || | Sbjct 29133 CTTGAACTTCATTAGAGAAACGTTCTACCAAGTTCTCGTTGACTATGCCGTCGGACGCCG 29074 Query 36573 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGTGTTA--GTTTATTCC 36629 |||| || || | || || || |||| ||||| | || | | | || |||| Sbjct 29073 CAAAGAAGGCGAGAACGTGGGAGATGAAATGCCGCTCGTTGTCGTTTAAACGATTGTTCC 29014 Query 36630 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 36689 | || | | || || || | |||| || || | ||||| || || ||||| || | Sbjct 29013 AGTCGTGAAGGTCCTTTGAAAGGTCCATCTCCTCGGCGGTCCAGAACGAAGCCTCCGCTT 28954 Query 36690 TTTTATACATATTCCAGAT 36708 | || ||||| | ||| || Sbjct 28953 TCTTGTACATTTGCCATAT 28935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 656490279962720